Job Description P0AFB1 Confidence 99.43% Date Thu Jan 5 11:25:48 GMT 2012 Rank 70 Aligned Residues 106 % Identity 13% Template c3k9iA_ PDB info PDB header:protein binding Chain: A: PDB Molecule:bh0479 protein; PDBTitle: crystal structure of putative protein binding protein (np_241345.1)2 from bacillus halodurans at 2.71 a resolution Resolution 2.71 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	L	A	R	M	E	Q	I	L	A	S	R	A	L	T	D	D	E	R	A	Q	L	L	Y	E	R	G	V	L	Y	D	S	L	G	L	R	A	L	A	R	N	D	F	S	Q	A	L	A	I	R	P	D	M	P	E	V	F	N	Y	L	G	I	Y	L	T	Q	A	G	N	F	D	A	A	Y	E	A	F	D	S
Query Conservation
Alig confidence																	.
Template Conservation																	.
Template Sequence		Q	A	V	P	Y	Y	E	K	A	I	A	S	G	L	Q	.	G	K	D	L	A	E	C	Y	L	G	L	G	S	T	F	R	T	L	G	E	Y	R	K	A	E	A	V	L	A	N	G	V	K	Q	F	P	N	H	Q	A	L	R	V	F	Y	A	X	V	L	Y	N	L	G	R	Y	E	Q	G	V	E	L	L	L	K
Template Known Secondary structure												S	S				.																		T	T																	T	T																T
Template Predicted Secondary structure																	.
Template SS confidence
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	E	L	D	P	T	Y	N	Y	A	H	L	N	R	G	I	A	L	Y	Y	G	G	R	D	K	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	I	A	E	T	S	D	D	E	T	I	Q	S	Y	K	Q	A	I	L	F	Y	A	D	K	L	D	E
Template Known Secondary structure															T								T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions