Job Description P0AFB1 Confidence 30.86% Date Thu Jan 5 11:25:48 GMT 2012 Rank 132 Aligned Residues 55 % Identity 13% Template c3i4gA_ PDB info PDB header:carbohydrate-binding protein Chain: A: PDB Molecule:susd-like carbohydrate binding protein bf1063; PDBTitle: crystal structure of a susd-like carbohydrate binding protein (bf0978)2 from bacteroides fragilis nctc 9343 at 1.35 a resolution Resolution 1.35 Å

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		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.														230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	Q	T	L	M	E	R	L	K	A	D	A	T	D	N	T	S	L	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	H	L	S	E	T	N	F	Y	L	G	K	Y	Y	L	S	L	G	D	L	D	S	A	T	A	L	F	K	L	A	V	A	N	N	V	H
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	A	D	I	L	K	W	C	V	T	E	F	T	A	A	A	A	D	L	P	R	F	S	A	I	P	A	G	E	A	G	R	A	C	K	Q	A	A	L	A	F	L	G	R	T	C	X	L	Q	K	D	W	K	S	G	A	K	A	F	H	D	I	X	E	L	G	D	N
Template Known Secondary structure																				S			G	G	G			G	G	G	T	T	S																		T
Template Predicted Secondary structure
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions