Job Description P0AFB1 Confidence 99.16% Date Thu Jan 5 11:25:48 GMT 2012 Rank 88 Aligned Residues 102 % Identity 13% Template c3fflC_ PDB info PDB header:cell cycle Chain: C: PDB Molecule:anaphase-promoting complex subunit 7; PDBTitle: crystal structure of the n-terminal domain of anaphase-2 promoting complex subunit 7 Resolution 2.50 Å

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		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.						.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.						.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.																																												.	.	.	.	.
Query SS confidence																	.	.	.	.	.																																												.	.	.	.	.
Query Sequence		L	Q	Q	E	V	I	L	A	R	M	E	Q	I	L	A	.	.	.	.	.	S	R	A	L	T	D	D	E	R	A	Q	L	L	Y	E	R	G	V	L	Y	D	S	L	G	L	R	A	L	A	R	N	D	F	S	Q	A	L	A	I	R	P	D	M	.	.	.	.	.	P	E	V	F	N	Y	L	G	I	Y	L	T
Query Conservation																	.	.	.	.	.																																												.	.	.	.	.
Alig confidence																	.	.	.	.	.																																												.	.	.	.	.
Template Conservation
Template Sequence		G	L	H	S	N	V	R	L	L	S	S	L	L	L	T	L	S	N	N	N	P	E	L	F	S	P	P	Q	K	Y	Q	L	L	V	Y	H	A	D	S	L	F	H	D	K	E	Y	R	N	A	V	S	K	Y	T	M	A	L	Q	Q	K	K	A	L	C	L	P	S	E	I	E	V	K	Y	K	L	A	E	C	Y	T
Template Known Secondary structure		T																				T	T	T	S																			T	T																	T	T
Template Predicted Secondary structure
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	G	N	F	D	A	A	Y	E	A	F	D	S	V	L	E	L	D	P	T	Y	N	Y	A	H	L	N	R	G	I	A	L
Query Conservation
Alig confidence																				.
Template Conservation																				.
Template Sequence		V	L	K	Q	D	K	D	A	I	A	I	L	D	G	I	P	S	R	.	Q	R	T	P	K	I	N	M	L	L	A	N	L	Y
Template Known Secondary structure				T											T	S		G	G	.	G													T
Template Predicted Secondary structure																				.
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions