Job Description P0AFB1 Confidence 99.64% Date Thu Jan 5 11:25:48 GMT 2012 Rank 47 Aligned Residues 222 % Identity 18% Template c3ceqB_ PDB info PDB header:motor protein, transport protein Chain: B: PDB Molecule:kinesin light chain 2; PDBTitle: the tpr domain of human kinesin light chain 2 (hklc2) Resolution 2.75 Å

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.									.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.	.
Query Sequence		Q	E	V	I	L	A	R	M	E	Q	I	L	A	S	R	A	L	T	D	D	E	R	A	Q	L	L	Y	E	R	G	V	L	Y	D	S	L	G	L	R	A	L	A	R	N	D	F	S	Q	A	L	A	I	R	P	D	M	P	E	V	.	.	.	.	.	.	.	.	F	N	Y	L	G	I	Y	L	T	Q	A	G	N
Query Conservation																																																													.	.	.	.	.	.	.	.
Alig confidence														.	.	.																																													.	.	.	.	.	.	.	.
Template Conservation														.	.	.
Template Sequence		C	K	Q	A	L	E	D	L	E	K	T	S	.	.	.	G	H	D	H	P	D	V	A	T	M	L	N	I	L	A	L	V	Y	R	D	Q	N	K	Y	K	E	A	A	H	L	L	N	D	A	L	A	I	R	E	K	T	L	G	K	D	H	P	A	V	A	A	T	L	N	N	L	A	V	L	Y	G	K	R	G	K
Template Known Secondary structure														.	.	.		S	S	S																	T	T																						T	T																			T
Template Predicted Secondary structure														.	.	.
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.				.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
		112	.	.	.	.	.	.	.	120	.	.	.									.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.										.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.
Query Sequence		F	D	A	A	Y	E	A	F	D	S	V	L	.	.	.	.	.	.	.	.	E	L	D	P	T	Y	N	Y	A	H	L	N	R	G	I	A	L	Y	Y	G	G	R	D	K	L	A	Q	D	D	L	L	A	F	Y	Q	D	D	P	N	D	.	.	.	.	.	.	.	.	.	P	F	R	S	L	W	L	Y	L	A	E
Query Conservation														.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	K	E	A	E	P	L	C	K	R	A	L	E	I	R	E	K	V	L	G	K	F	H	P	D	V	A	K	Q	L	S	N	L	A	L	L	C	Q	N	Q	G	K	A	E	E	V	E	Y	Y	Y	R	R	A	L	E	I	Y	A	T	R	L	G	P	D	D	P	N	V	A	K	T	K	N	N	L	A	S	C	Y	L
Template Known Secondary structure																						T	T																	T	T	T																				S		T	T
Template Predicted Secondary structure
Template SS confidence
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.										.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.				.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.																					.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.																					.	.	.
Query Sequence		Q	K	L	D	E	K	Q	A	K	E	V	L	K	Q	H	F	E	.	.	.	.	.	.	.	.	.	K	S	D	K	E	Q	W	G	W	N	I	V	E	F	Y	L	G	N	I	S	.	.	.	E	Q	T	L	M	E	R	L	K	A	D	A	T	D	N	T	S	L	A	E	H	L	S	E	T	N	F	Y	L	G	K
Query Conservation																			.	.	.	.	.	.	.	.	.																					.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.																					.	.	.
Template Conservation
Template Sequence		K	Q	G	K	Y	Q	D	A	E	T	L	Y	K	E	I	L	T	R	A	H	E	K	E	F	G	S	V	N	G	D	N	K	P	I	W	M	H	A	E	E	R	E	E	S	K	D	K	R	R	D	S	A	P	Y	G	E	Y	G	S	W	Y	K	A	C	K	V	D	S	P	T	V	N	T	T	L	R	S	L	G	A
Template Known Secondary structure				T																							S			S	S	S													T	T					S	S	S		S	S	S	T	T					T	T
Template Predicted Secondary structure
Template SS confidence
		378	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	Y	L	S	L	G	D	L	D	S	A	T	A	L	F	K	L	A	V	A	N	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Y	R	R	Q	G	K	L	E	A	A	H	T	L	E	D	C	A	S	R	N	R
Template Known Secondary structure						T	T															T
Template Predicted Secondary structure
Template SS confidence
		458	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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