Job Description P0AFB1 Confidence 99.24% Date Thu Jan 5 11:25:48 GMT 2012 Rank 86 Aligned Residues 92 % Identity 14% Template c2kcvA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:tetratricopeptide repeat domain protein; PDBTitle: solution nmr structure of tetratricopeptide repeat domain2 protein sru_0103 from salinibacter ruber, northeast3 structural genomics consortium (nesg) target srr115c Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.			.	.	.	.
Predicted Secondary structure																																																																												.	.
Query SS confidence																																																																												.	.
Query Sequence		D	D	E	R	A	Q	L	L	Y	E	R	G	V	L	Y	D	S	L	G	L	R	A	L	A	R	N	D	F	S	Q	A	L	A	I	R	P	D	M	P	E	V	F	N	Y	L	G	I	Y	L	T	Q	A	G	N	F	D	A	A	Y	E	A	F	D	S	V	L	E	L	D	P	T	Y	N	Y	.	.	A	H	L	N
Query Conservation																																																																												.	.
Alig confidence																																																																												.	.
Template Conservation
Template Sequence		D	P	E	D	P	F	T	R	Y	A	L	A	Q	E	H	L	K	H	D	N	A	S	R	A	L	A	L	F	E	E	L	V	E	T	D	P	D	Y	V	G	T	Y	Y	H	L	G	K	L	Y	E	R	L	D	R	T	D	D	A	I	D	T	Y	A	Q	G	I	E	V	A	R	E	E	G	T	Q	K	D	L	S	E
Template Known Secondary structure			T	T	S														T	T																	T	T															T	T																			T	S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		136	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	I	A	L	Y	Y	G	G	R	D	K	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Q	D	A	K	L	K	A	E	G	L	E	H	H
Template Known Secondary structure										T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions