Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFB1
Confidence99.03%DateThu Jan 5 11:25:48 GMT 2012
Rank92Aligned Residues241
% Identity8%Templatec1slyA_
PDB info PDB header:glycosyltransferaseChain: A: PDB Molecule:70-kda soluble lytic transglycosylase; PDBTitle: complex of the 70-kda soluble lytic transglycosylase with2 bulgecin a
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4950.........60.........70.........80.........90.........100.........110.........120........
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Query Sequence  QILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPT
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Template Sequence  RGLLAFSPEKPGTTEAQCNYYYAKWNTGQSEEAWQGAKELWLTGKSQPNACDKLFSVWRASGKQDPLAYLERIRLAMKAG
Template Known Secondary structure 

S

SSTT
S
SS


TTTT
S
TT
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   8990.........100.........110.........120.........130.........140.........150.........160........
 
   129130.... .....140.........150.........160.........170.........180.........190.......
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Query Sequence  YNYAHL. . . . . . . . . . . NRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWLYLAEQKLDEKQAKEVLKQHFEKSDKEQ
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Template Sequence  NTGLVTVLAGQMPADYQTIASAIISLANNPNTVLTFARTTGATDFTRQMAAVAFASVARQDAENARLMIPSLAQAQQLNE
Template Known Secondary structure 
S

TTTGGG
GGGTTS



TT

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   169170.........180.........190.........200.........210.........220.........230.........240........
 
   198.200.........210.........220.........230.........240.........250.........260.........270.......
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Query Sequence  WGWNIVEFYLGNISEQTLMERLKADATDNTSLAEHLSETNFYLGKYYLSLGDLDSATALFKLAVANNVHNFVEHRYALLE
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Template Sequence  DQIQELRDIVAWRLMGNDVTDEQAKWRDDAIMRSQSTSLIERRVRMALGTGDRRGLNTWLARLPMEAKEK. . . . DEWRYW
Template Known Secondary structure  GGG
STTS
T


TTT
TS
TTGGGS....
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   249250.........260.........270.........280.........290.........300.........310........ .320....
 
   278.280.........290...
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Query Sequence  LSLLGQDQDDLAESDQ
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Template Sequence  QADLLLERGREAEAKE
Template Known Secondary structure  TT
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   325....330.........340
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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