Job Description P0AFB1 Confidence 93.32% Date Thu Jan 5 11:25:48 GMT 2012 Rank 113 Aligned Residues 211 % Identity 16% Template c1b89A_ PDB info PDB header:clathrin Chain: A: PDB Molecule:protein (clathrin heavy chain); PDBTitle: clathrin heavy chain proximal leg segment (bovine) Resolution 2.60 Å

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		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Y	E	R	G	V	L	Y	D	S	L	G	L	R	A	L	A	R	N	D	F	S	Q	A	L	A	I	R	P	D	M	P	E	V	F	N	Y	L	G	I	Y	L	T	Q	A	G	N	F	D	A	A	Y	E	A	F	D	S	V	L	E	L	D	P	T	Y	N	Y	A	H	L	N	R	G	I	A	L	Y	Y	G	G
Query Conservation
Alig confidence																										.	.	.	.	.																															.	.	.	.
Template Conservation																										.	.	.	.	.																															.	.	.	.
Template Sequence		F	G	R	L	A	S	T	L	V	H	L	G	E	Y	Q	A	A	V	D	G	A	R	K	A	.	.	.	.	.	N	S	T	R	T	W	K	E	V	C	F	A	C	V	D	G	K	E	F	R	L	A	Q	X	C	G	L	H	I	V	.	.	.	.	V	H	A	D	E	L	E	E	L	I	N	Y	Y	Q	D	R	G
Template Known Secondary structure											T	T	T													.	.	.	.	.	T															T	T								T	T	T	T	T	T	.	.	.	.	T															T	T
Template Predicted Secondary structure																										.	.	.	.	.																															.	.	.	.
Template SS confidence
		1224	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.						.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.					.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.										.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.
Query Sequence		R	D	K	L	A	Q	D	D	L	L	A	F	Y	Q	D	D	P	N	D	P	F	R	S	L	W	L	Y	L	A	E	Q	K	L	D	E	K	Q	A	K	E	V	L	K	Q	.	.	.	.	.	.	.	.	.	H	F	E	K	S	D	K	E	Q	W	G	W	N	I	V	E	F	Y	L	G	N	I	S	E	Q	T	L
Query Conservation																																														.	.	.	.	.	.	.	.	.
Alig confidence																																														.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	F	E	E	L	I	T	X	L	E	A	A	L	G	L	E	R	A	H	X	G	X	F	T	E	L	A	I	L	Y	S	K	F	K	P	Q	K	X	R	E	H	L	E	L	F	W	S	R	V	N	I	P	K	V	L	R	A	A	E	Q	A	H	L	W	A	E	L	V	F	L	Y	D	K	Y	E	E	Y	D	N	A
Template Known Secondary structure														T	T	S	T	T															T	T													S	T	T	S											T	T	T												T	T
Template Predicted Secondary structure
Template SS confidence
		1295	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.
		216	.	.	.	220	.	.	.	.	.	.									.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.																													.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	E	R	L	K	A	D	A	T	D	N	.	.	.	.	.	.	.	.	T	S	L	A	E	H	L	S	E	T	N	F	Y	L	G	K	Y	Y	L	S	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	D	L	D	S	A	T	A	L	F	K	L
Query Conservation													.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	I	T	X	X	N	H	P	T	D	A	W	K	E	G	Q	F	K	D	I	I	T	K	V	A	N	V	E	L	Y	Y	R	A	I	Q	F	Y	L	E	F	K	P	L	L	L	N	D	L	L	X	V	L	S	P	R	L	D	H	T	R	A	V	N	Y	F	S	K	V	K	Q	L	P	L	V	K	P	Y	L	R	S
Template Known Secondary structure								S	T	T	T	T														S	S	T															G	G	G									G	G	G													T	T		T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		1375	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.	.	.	.	.	.	.	1400	.	.	.	.	.	.	.	.	.	1410	.	.	.	.	.	.	.	.	.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.	.	.	.	.	.	1440	.	.	.	.	.	.	.	.	.	1450	.	.	.	.
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	A	N	N	V	H	N	F	V	E	H	R	Y	A	L	L	E	L	S	L	L	G	Q	D	Q	D	D	L	A	E
Query Conservation
Alig confidence														.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.
Template Sequence		V	Q	N	H	N	N	K	S	V	N	E	S	.	.	.	.	.	.	L	N	N	L	F	I	T	E	E	D	Y	Q	A
Template Known Secondary structure				T	T									.	.	.	.	.	.								T	T
Template Predicted Secondary structure														.	.	.	.	.	.
Template SS confidence
		1455	.	.	.	.	1460	.	.	.	.	.	.							.	.	.	1470	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions