 |
Job Description | P76559 | Confidence | 4.50% | Date | Thu Jan 5 12:24:37 GMT 2012 |
Rank | 43 | Aligned Residues | 60 |
% Identity | 15% | Template | c3nzqB_ |
PDB info |
PDB header:lyase | Chain: B: PDB Molecule:biosynthetic arginine decarboxylase; |
PDBTitle: crystal structure of biosynthetic arginine decarboxylase adc (spea)2 from escherichia coli, northeast structural genomics consortium3 target er600
|
Resolution | 3.10 Å |
|
 |
  |   |
178 | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | |
|
|
|
|
. | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | A | P | A | L | K | E | V | A | V | V | N | P | T | P | T | P | L | S | L | E | E | R | N | D | L | L | D | Y | G | N | W | R | M | N | G | L | R | C | . |
. |
. |
. |
. |
S | L | D | P | L | R | R | E | V | N | V | T | A | L | T | D | D | K | A | L | M | M | I | S | C | E | A | G | A | Y | N | T |
Query Conservation |   |
  |
|
|   |
|
|   |
|   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
| . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|
|   |
|   |
|   |   |
|
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|   |
|
|   |
|   |
|   |   |   |   |   |
|   |
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|   |
|   |   |
|
|   |   |   |   |   |   |   |   |
|   |
|
|   |   |   |   |   |
|   |
|   |
|
|   |
|
|   |
|
|
|
|
|
Template Sequence |   |
P | V | L | P | L | E | G | L | D | Q | V | P | E | R | R | A | V | L | L | D | I | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
T | C | D | S | D | G | A | I | D | H | Y | I | D | G | D | G | I | A | T | T | M | P | M | P | E | Y | D | P | E | N | P | P | M | L | G | F | F | M | V | G | A | Y | Q | E |
Template Known Secondary structure |   |
|  |  |  | S | S |
| T | T | S |
|
|
|  |  |  |  |  |  |  | S | . | . | . | . | . | . | . | . | . | . | . |
| S | S | T | T |
| B |
|
|
|  |  |  | T | T |  |  |  | S | S |  |  |  |
| S |
|
| T | T | S |
|
|  |  |  |  |
| S |
|
| S | S |
| G |
Template Predicted Secondary structure |   |
|  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
506 | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|