Job Description P76559 Confidence 4.26% Date Thu Jan 5 12:24:37 GMT 2012 Rank 45 Aligned Residues 66 % Identity 18% Template c3eudE_ PDB info PDB header:nuclear protein Chain: E: PDB Molecule:protein shq1; PDBTitle: structure of the cs domain of the essential h/aca rnp2 assembly protein shq1p Resolution 2.40 Å

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		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.		.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		T	D	D	K	A	L	M	M	I	S	C	E	A	G	A	Y	N	T	I	D	L	.	A	W	I	V	S	R	K	K	P	L	A	S	R	P	V	R	L	R	L	P	F	N	N	G	Q	E	T	N	E	L	E	L	M	N	A	T	F	D	E	K	S	R	E	L	V	T	L
Query Conservation																							.
Alig confidence																							.																															.	.
Template Conservation																																																						.	.
Template Sequence		D	E	E	F	I	F	L	K	I	F	I	S	N	I	R	F	S	A	V	G	L	E	I	I	I	Q	E	N	X	I	I	F	H	L	S	P	Y	Y	L	R	L	R	F	P	H	E	L	I	D	D	E	R	.	.	S	T	A	Q	Y	D	S	K	D	E	C	I	N	V	K
Template Known Secondary structure			S	S										S					S	S	S							T	T							T	T								S	S					S	T	T	.	.							T	T	T	T
Template Predicted Secondary structure																																																						.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.			.	.	.	.	.	.	.	70	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions