Job Description P76559 Confidence 3.17% Date Thu Jan 5 12:24:37 GMT 2012 Rank 76 Aligned Residues 72 % Identity 14% Template c1u38A_ PDB info PDB header:protein transport Chain: A: PDB Molecule:amyloid beta a4 precursor protein-binding, PDBTitle: auto-inhibition mechanism of x11s/mints family scaffold2 proteins revealed by the closed conformation of the tandem3 pdz domains Resolution UNK

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		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.						.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure																																										.	.	.	.	.
Query SS confidence																																										.	.	.	.	.
Query Sequence		H	N	G	L	V	M	T	L	S	R	S	A	G	A	H	T	D	A	V	L	R	I	E	R	G	G	L	K	S	P	E	A	S	E	G	E	I	A	P	R	.	.	.	.	.	L	L	L	D	G	E	P	L	A	L	S	G	D	K	W	R	I	S	P	W	L	L	V	T	D	D	T	A	T	I	T	A	F	L	Q
Query Conservation																																										.	.	.	.	.
Alig confidence																																										.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	K	G	E	I	L	G	V	V	I	V	E	S	G	W	G	S	I	L	P	T	V	I	I	A	N	M	M	H	G	G	P	A	E	K	S	G	K	L	N	I	G	D	Q	I	M	S	I	N	G	T	S	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	G	L	P	L	S	T	C	Q	S	I	I	K
Template Known Secondary structure			T	T												S	S		S	S	S									T	T	S							S			T	T							T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.															.	80	.	.	.	.	.	.	.	.	.	90	.
		124	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	I	Q	E	G	K	A	I	T	L	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	L	K	N	Q	S	R	V	K	L	N
Template Known Secondary structure			T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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