Return to main results Retrieve Phyre Job Id

Job DescriptionP76559
Confidence3.21%DateThu Jan 5 12:24:37 GMT 2012
Rank73Aligned Residues73
% Identity15%Templatec1p1eA_
PDB info PDB header:protein bindingChain: A: PDB Molecule:glutamate receptor interacting protein; PDBTitle: structural insights into the inter-domain chaperoning of2 tandem pdz domains in glutamate receptor interacting3 proteins
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   48.50.........60.........70.........80........ .90.........100.........110.........120..
Predicted Secondary structure 
























.....


















Query SS confidence 








































. . . . .

































Query Sequence  DHNGLVMTLSRSAGAHTDAVLRIERGGLKSPEASEGEIAPR. . . . . LLLDGEPLALSGDKWRISPWLLVTDDTATITAFL
Query Conservation        
 
 
 


       
                  .....
 


  
                     
 


Alig confidence 








































.....







..............











Template Conservation      

  
  
          
 
  
  

 
   
 
  

 

 


  
..............      

  

Template Sequence  PVTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPT. . . . . . . . . . . . . . EDSTFEEANQLL
Template Known Secondary structure  SSSS




SSSSSS

S






TT
TTS

TT
TTB

..............
S

Template Predicted Secondary structure 




























..............



Template SS confidence 















































































   33......40.........50.........60.........70.........80...... ...90........
 
   123......130....
Predicted Secondary structure 



Query SS confidence 











Query Sequence  QMIQEGKAITLR
Query Conservation   

     
   
Alig confidence 











Template Conservation          
 
 
Template Sequence  RDSSITSKVTLE
Template Known Secondary structure  GGGGTT
Template Predicted Secondary structure 



Template SS confidence 











   99100.........110
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions