 |
Job Description | P0A7B5 | Confidence | 99.44% | Date | Wed Jan 25 15:20:17 GMT 2012 |
Rank | 43 | Aligned Residues | 69 |
% Identity | 17% | Template | c3zv0D_ |
PDB info |
PDB header:cell cycle | Chain: D: PDB Molecule:h/aca ribonucleoprotein complex subunit 4; |
PDBTitle: structure of the shq1p-cbf5p complex
|
Resolution | 2.80 Å |
|
 |
  |   |
268 | . | |
270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  | . |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
W | I | . |
F | G | A | P | P | A | G | E | I | T | V | D | E | G | A | T | A | A | I | L | E | R | G | S | S | L | L | P | K | G | I | K | S | V | T | G | N | F | S | R | G | E | V | I | R | I | C | N | L | E | G | R | D | I | A | H | G | V | S | R | Y | N | S | D | A | L | R | R |
Query Conservation |   |
|   | . |   |   |   |   |   |   |
|   |   |   |
|
|   |
|
|   |   |
|
|   |   |   |   |   |
|
|
|   |   |
|
|   |   |
|   |
|   |
|   |   |
|
|   |
|   |
|   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |
Alig confidence |   |
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |   |
|   |   |   |
|
|
|
|
|
|
|   |
|
|   |
|
|   | . |   |
|
|   |
|   |   |
|
|
|
|   |   |   |   |   |
|   |   |
|
|   |
|   |
|
|
|   |   |
|
|   |
|
|
|
|
|
|   |
|
|
|   |
|
|   |   |
Template Sequence |   |
P | L | E | T | L | L | V | G | Y | K | R | I | V | V | K | D | S | A | V | N | A | V | C | . |
Y | G | A | K | L | M | I | P | G | L | L | R | Y | E | E | G | I | E | L | Y | D | E | I | V | L | I | T | T | K | G | E | A | I | A | V | A | I | A | Q | M | S | T | V | D | L | A | S |
Template Known Secondary structure |   |
| G | G | G | G | G | T | T | S |  |  |  |  |  |
|  |  |  |  |  |  |  |  | . | T | T |
|
|  |  | G | G | G |  |  |  |  |
| T | T |
|
| T | T |
|  |  |  |  |  |
| T | T |
|
|  |  |  |  |  |  |  | S | S |
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  | . |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
258 | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | |
. | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|