Job Description P0A7B5 Confidence 100.00% Date Wed Jan 25 15:20:17 GMT 2012 Rank 25 Aligned Residues 227 % Identity 22% Template c3ll9A_ PDB info PDB header:transferase Chain: A: PDB Molecule:isopentenyl phosphate kinase; PDBTitle: x-ray structures of isopentenyl phosphate kinase Resolution 2.15 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.				.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.									.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																			.	.	.																																										.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.																																										.	.	.	.	.	.	.	.
Query Sequence		T	L	V	V	K	L	G	T	S	V	L	T	G	G	S	R	R	.	.	.	L	N	R	A	H	I	V	E	L	V	R	Q	C	A	Q	L	H	A	A	G	H	R	I	V	I	V	T	S	G	A	I	A	A	G	R	E	H	L	G	Y	P	.	.	.	.	.	.	.	.	E	L	P	A	T	I	A	S	K	Q	L
Query Conservation																			.	.	.																																										.	.	.	.	.	.	.	.
Alig confidence																			.	.	.																				.	.																					.	.	.	.	.	.	.	.
Template Conservation																																									.	.
Template Sequence		X	I	I	L	K	L	G	G	S	V	I	T	R	K	D	S	E	E	P	A	I	D	R	D	N	L	E	R	I	A	S	E	I	G	N	A	S	P	S	.	.	S	L	X	I	V	H	G	A	G	S	F	G	H	P	F	A	G	E	Y	R	I	G	S	E	I	E	N	E	E	D	L	R	R	R	R	F	G	F	A
Template Known Secondary structure																	S	S	S																					S	.	.	S								G	G	G	T								T	T	T	S				S
Template Predicted Secondary structure																																									.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.			40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.		.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.				.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																																													.																				.	.	.
Query SS confidence																																													.																				.	.	.
Query Sequence		L	A	A	V	G	Q	S	R	L	I	Q	L	W	E	Q	L	F	S	I	Y	G	I	H	V	G	Q	M	L	L	T	R	A	D	M	E	D	R	E	R	F	L	N	A	.	R	D	T	L	R	A	L	L	D	N	N	I	V	P	V	I	N	E	N	.	.	.	D	A	V	A	T	A	E	I	K	V	G	D	N	D
Query Conservation																																													.																				.	.	.
Alig confidence																																													.																				.	.	.
Template Conservation
Template Sequence		L	T	Q	N	W	V	K	K	L	N	S	H	V	C	D	A	L	L	A	E	G	I	P	A	V	S	X	Q	P	S	A	F	I	R	A	H	A	G	R	I	S	H	A	D	I	S	L	I	R	S	Y	L	E	E	G	X	V	P	V	V	Y	G	D	V	V	L	D	S	D	R	R	L	K	F	S	V	I	S	G	D
Template Known Secondary structure																					T	T								G	G	G	T					T	T																T	T												B	S		T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	S	A	L	A	A	I	L	A	G	A	D	K	L	L	L	L	T	D	Q	K	G	L	Y	T	A	D	P	R	S	N	P	Q	A	E	L	I	K	D	V	Y	G	I	D	D	A	L	R	A	I	A	G	D	S	V	S	G	L	G	T	G	G	M	S	T	K	L	Q	A	A	D	V	A	C	R	A	G	I	D
Query Conservation
Alig confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	L	I	N	H	F	S	L	R	L	X	P	E	R	V	I	L	G	T	D	V	D	G	V	Y	T	R	N	P	K	K	H	P	D	A	R	L	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	I	G	X	V	G	K	I	R	E	L	L	L	L	A	E	K	G	V	E
Template Known Secondary structure														S							S	S	S	S		B	S	S		T	T	T		T	T			B		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B				S												T	T
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.																						.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.		.	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		T	I	I	A	A	G	S	K	P	G	V	I	G	D	V	M	E	G	I	S	V	.	G	T	L	F
Query Conservation																							.
Alig confidence																							.
Template Conservation
Template Sequence		S	E	I	I	N	A	A	V	P	G	N	I	E	R	A	L	L	G	E	E	V	R	G	T	R	I
Template Known Secondary structure							S	S	S	T	T								T				S	S
Template Predicted Secondary structure
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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