Job Description P0A7B5 Confidence 100.00% Date Wed Jan 25 15:20:17 GMT 2012 Rank 28 Aligned Residues 223 % Identity 15% Template c2va1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:uridylate kinase; PDBTitle: crystal structure of ump kinase from ureaplasma parvum Resolution 2.50 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20		.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		D	S	Q	T	L	V	V	K	L	G	T	S	V	L	T	G	G	S	.	R	R	L	N	R	A	H	I	V	E	L	V	R	Q	C	A	Q	L	H	A	A	G	H	R	I	V	I	V	T	S	G	A	I	A	A	G	R	E	H	L	G	Y	P	E	L	P	A	T	I	A	S	K	Q	L	L	A	A	V	G	Q	S
Query Conservation																				.
Alig confidence																				.
Template Conservation
Template Sequence		R	K	Q	R	I	V	I	K	I	S	G	A	C	L	K	Q	N	D	S	S	I	I	D	F	I	K	I	N	D	L	A	E	Q	I	E	K	I	S	K	K	Y	I	V	S	I	V	L	G	G	G	N	I	W	R	G	S	I	A	K	E	L	D	M	D	R	N	L	A	D	N	M	G	M	M	A	T	I	I	N	G
Template Known Secondary structure				S								G	G	G	G		S	S	T	T		S	S																T	T	T	S									T	T	T									T	T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	I	Q	L	W	E	Q	L	F	S	I	Y	G	I	H	V	G	Q	M	L	L	T	R	A	D	M	E	D	R	E	R	F	L	N	A	R	D	T	L	R	A	L	L	D	N	N	I	V	P	V	I	N	E	N	D	A	V	A	T	A	E	I	K	V	G	D	N	D	N	L	S	A	L	A	A	I	L	A	G
Query Conservation
Alig confidence						.	.	.											.	.																		.																				.	.	.	.	.
Template Conservation						.	.	.											.	.																		.																				.	.	.	.	.
Template Sequence		L	A	L	E	.	.	.	N	A	L	N	H	L	N	V	N	T	.	.	I	V	L	S	A	I	K	C	D	K	L	V	H	E	S	S	A	.	N	N	I	K	K	A	I	E	K	E	Q	V	M	I	F	V	A	G	T	.	.	.	.	.	G	F	P	Y	F	T	T	D	S	C	A	A	I	R	A	A	E	T	E
Template Known Secondary structure						.	.	.					T	T	T				.	.					S	S			T	T	T							.									T	T							S	T	T	.	.	.	.	.	S	S	S	S															T
Template Predicted Secondary structure						.	.	.											.	.																		.																				.	.	.	.	.
Template SS confidence
		82	.	.	.				.	.	.	.	90	.	.	.	.	.			.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.						.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		162	.	.	.	.	.	.	.	170		.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		A	D	K	L	L	L	L	T	D	.	Q	K	G	L	Y	T	A	D	P	R	S	N	P	Q	A	E	L	I	K	D	V	Y	G	I	D	D	A	L	R	A	I	A	G	D	S	V	S	G	L	G	T	G	G	M	S	T	K	L	Q	A	A	D	V	A	C	R	A	G	I	D	T	I	I	A	A	G	S	K	P	G
Query Conservation											.
Alig confidence											.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	S	I	I	L	M	G	K	N	G	V	D	G	V	Y	D	S	D	F	Y	E	H	I	T	F	N	M	A	L	T	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	L	K	V	M	D	A	T	A	L	A	L	C	Q	E	N	N	I	N	L	L	V	F	N	I	D	K	P	N
Template Known Secondary structure			S							S	S			S	B		S				B	S											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T			S	S											T	T								S	S	S	T	T
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.																					.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	G	D	V	M	E	G	I	S	V	G	T	L	F	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	I	V	D	V	L	E	K	K	N	K	Y	T	I	V	S
Template Known Secondary structure								T	T		S
Template Predicted Secondary structure
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions