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Job DescriptionP0A7B5
Confidence100.00%DateWed Jan 25 15:20:17 GMT 2012
Rank10Aligned Residues243
% Identity20%Templatec2v5hB_
PDB info PDB header:transcriptionChain: B: PDB Molecule:acetylglutamate kinase; PDBTitle: controlling the storage of nitrogen as arginine: the2 complex of pii and acetylglutamate kinase from3 synechococcus elongatus pcc 7942
Resolution2.75 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60....... ..70....
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Query Sequence  DSQTLVVKLGTSVLTGGSRRLNRAHIVELVRQCAQLHAAGHRIVIVTSGAIAAGREHLGYPELPA. . . . . . . . TIASKQL
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Template Sequence  AGRTVVVKYGGAAMKQE. . . . . . ELKEAVMRDIVFLACVGMRPVVVHGGGPEINAWLGRVGIEPQFHNGLRVTDADTMEV
Template Known Secondary structure  TT

TS......TT


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B
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   28.30.........40.... .....50.........60.........70.........80.........90.........100.
 
   75....80.........90.........100.........110. ........120.........130.........140..
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Query Sequence  LAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDR. . . . . . . . . . . . ERFLNARDTLRALLDNNIVPVINENDAVATA
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Template Sequence  VEMVLVGRVNKDIVSRINTTGGRAVGFCGTDGRLVLARPHDQEGIGFVGEVNSVNSEVIEPLLERGYIPVISSVAADENG
Template Known Secondary structure  TT

TTGGGS
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GGGTTT
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   102.......110.........120.........130.........140.........150.........160.........170.........180.
 
   143......150.........160.........170.........180.........190.........200.........210.........220..
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Query Sequence  EIKVGDNDNLSALAAILAGADKLLLLTDQKGLYTADPRSNPQAELIKDVYGIDDALRAIAGDSVSGLGTGGMSTKLQAAD
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Template Sequence  QSFNINADTVAGEIAAALNAEKLILLTDTRGILEDPKRPESLIPRLNIPQSRELI. . . . . . . . AQGIVGGGMIPKVDCCI
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   182.......190.........200.........210.........220.........230...... ...240.........250...
 
   223...... 230.........240.... .....250.........
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Query Sequence  VACRAGI. DTIIAAGSKPGVIGD. VMEGISVGTLFHAQA
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Template Sequence  RSLAQGVRAAHIIDGRIPHALLLEIFTDAGIGTMIVGSG
Template Known Secondary structure  TT
STTSTT



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   254.....260.........270.........280.........290..
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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