Job Description P0A7B5 Confidence 100.00% Date Wed Jan 25 15:20:17 GMT 2012 Rank 9 Aligned Residues 242 % Identity 22% Template c2rd5A_ PDB info PDB header:protein binding Chain: A: PDB Molecule:acetylglutamate kinase-like protein; PDBTitle: structural basis for the regulation of n-acetylglutamate kinase by pii2 in arabidopsis thaliana Resolution 2.51 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.									.	.	70	.	.	.	.
Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.	.	.
Query Sequence		D	S	Q	T	L	V	V	K	L	G	T	S	V	L	T	G	G	S	R	R	L	N	R	A	H	I	V	E	L	V	R	Q	C	A	Q	L	H	A	A	G	H	R	I	V	I	V	T	S	G	A	I	A	A	G	R	E	H	L	G	Y	P	E	L	P	A	.	.	.	.	.	.	.	.	T	I	A	S	K	Q	L
Query Conservation																																																																			.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.																																											.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.
Template Sequence		R	G	K	T	I	V	V	K	Y	G	G	A	A	M	T	S	P	.	.	.	.	.	.	E	L	K	S	S	V	V	S	D	L	V	L	L	A	C	V	G	L	R	P	I	L	V	H	G	G	G	P	D	I	N	R	Y	L	K	Q	L	N	I	P	A	E	F	R	D	G	L	R	V	T	D	A	T	T	M	E	I
Template Known Secondary structure		T	T									T							.	.	.	.	.	.																T	T																				T	T							T	T				B
Template Predicted Secondary structure																			.	.	.	.	.	.
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50							.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.														.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	A	A	V	G	Q	S	R	L	I	Q	L	W	E	Q	L	F	S	I	Y	G	I	H	V	G	Q	M	L	L	T	R	A	D	M	E	D	R	E	R	F	L	N	A	.	.	.	.	.	.	.	.	.	.	.	.	.	R	D	T	L	R	A	L	L	D	N	N	I	V	P	V	I	N	E	N	D	A	V	A	T
Query Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	S	M	V	L	V	G	K	V	N	K	N	L	V	S	L	I	N	A	A	G	A	T	A	V	G	L	S	G	H	D	G	R	L	L	T	A	R	P	V	P	N	S	A	Q	L	G	F	V	G	E	V	A	R	V	D	P	S	V	L	R	P	L	V	D	Y	G	Y	I	P	V	I	A	S	V	A	A	D	D	S
Template Known Secondary structure									T												T	T	S							T	T	G	G	G								T	T					B	S									G	G	G							T	T							S					T	T
Template Predicted Secondary structure
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	I	K	V	G	D	N	D	N	L	S	A	L	A	A	I	L	A	G	A	D	K	L	L	L	L	T	D	Q	K	G	L	Y	T	A	D	P	R	S	N	P	Q	A	E	L	I	K	D	V	Y	G	I	D	D	A	L	R	A	I	A	G	D	S	V	S	G	L	G	T	G	G	M	S	T	K	L	Q	A	A
Query Conservation
Alig confidence																																									.	.	.																		.	.	.	.	.
Template Conservation																																									.	.	.																		.	.	.	.	.
Template Sequence		G	Q	A	Y	N	I	N	A	D	T	V	A	G	E	L	A	A	A	L	G	A	E	K	L	I	L	L	T	D	V	A	G	I	L	E	N	K	E	D	.	.	.	P	S	S	L	I	K	E	I	D	I	K	G	V	K	K	M	I	.	.	.	.	.	E	D	G	K	V	A	G	G	M	I	P	K	V	K	C	C
Template Known Secondary structure		S																			T		S							S	S	S	S			S	S	S	S		.	.	.	T	T	S															.	.	.	.	.		T	T	S	S		T	T
Template Predicted Secondary structure																																									.	.	.																		.	.	.	.	.
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.				.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.						.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
		222	.	.	.	.	.	.	.	230		.	.	.	.	.	.	.	.	.	240	.	.		.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure											.													.
Query SS confidence											.													.
Query Sequence		D	V	A	C	R	A	G	I	D	.	T	I	I	A	A	G	S	K	P	G	V	I	.	G	D	V	M	E	G	I	S	V	G	T	L	F	H	A	Q
Query Conservation											.													.
Alig confidence											.													.
Template Conservation
Template Sequence		I	R	S	L	A	Q	G	V	K	T	A	S	I	I	D	G	R	R	Q	H	S	L	L	H	E	I	M	S	D	E	G	A	G	T	M	I	T	G	R
Template Known Secondary structure							T	T		S							T	T	S	T	T								S	S	S		S
Template Predicted Secondary structure
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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