Job Description P0A7B5 Confidence 100.00% Date Wed Jan 25 15:20:17 GMT 2012 Rank 24 Aligned Residues 236 % Identity 19% Template c2r98A_ PDB info PDB header:transferase Chain: A: PDB Molecule:putative acetylglutamate synthase; PDBTitle: crystal structure of n-acetylglutamate synthase (selenomet2 substituted) from neisseria gonorrhoeae Resolution 2.40 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.									.	.	70	.	.	.	.
Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.	.	.
Query Sequence		D	S	Q	T	L	V	V	K	L	G	T	S	V	L	T	G	G	S	R	R	L	N	R	A	H	I	V	E	L	V	R	Q	C	A	Q	L	H	A	A	G	H	R	I	V	I	V	T	S	G	A	I	A	A	G	R	E	H	L	G	Y	P	E	L	P	A	.	.	.	.	.	.	.	.	T	I	A	S	K	Q	L
Query Conservation																																																																			.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.
Template Sequence		R	G	T	T	L	V	A	G	I	D	G	R	L	L	E	G	G	.	.	.	.	.	.	.	T	L	N	K	L	A	A	D	I	G	L	L	S	Q	L	G	I	R	L	V	L	I	H	G	A	Y	H	F	L	D	R	L	A	A	A	Q	G	R	T	P	H	Y	C	R	G	L	R	V	T	D	E	T	S	L	G	Q
Template Known Secondary structure		T	T									G	G	G	S	S	S	S	.	.	.	.	.	.	.															T	T																				S	S							T	T				B
Template Predicted Secondary structure																			.	.	.	.	.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.								.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110											.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.
Query Sequence		L	A	A	V	G	Q	S	R	L	I	Q	L	W	E	Q	L	F	S	I	Y	G	I	H	V	G	Q	M	L	L	T	R	A	D	M	E	D	.	.	.	.	.	.	.	.	.	.	R	E	R	F	L	N	A	R	D	T	L	R	A	L	L	D	N	N	I	V	P	V	I	N	E	N	D	A	V	A	T	A	E	I
Query Conservation																																						.	.	.	.	.	.	.	.	.	.
Alig confidence						.																																.	.	.	.	.	.	.	.	.	.
Template Conservation						.
Template Sequence		A	Q	Q	F	.	A	G	T	V	R	S	R	F	E	A	A	L	C	G	S	S	V	P	L	V	S	G	N	F	L	T	A	R	P	I	G	V	I	D	G	T	D	X	E	Y	A	G	V	I	R	K	T	D	T	A	A	L	R	F	Q	L	D	A	G	N	I	V	W	X	P	P	L	G	H	S	Y	G	G	K	T
Template Known Secondary structure						.																																		T	T				B	T	B																	T	T							S					T	T	S
Template Predicted Secondary structure						.
Template SS confidence
		95	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	G	D	N	D	N	L	S	A	L	A	A	I	L	A	G	A	D	K	L	L	L	L	T	D	Q	K	G	L	Y	T	A	D	P	R	S	N	P	Q	A	E	L	I	K	D	V	Y	G	I	D	D	A	L	R	A	I	A	G	D	S	V	S	G	L	G	T	G	G	M	S	T	K	L	Q	A	A	D	V	A
Query Conservation
Alig confidence																																		.	.	.	.	.	.																			.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.																			.	.	.	.	.	.	.
Template Sequence		F	N	L	D	X	V	Q	A	A	A	S	V	A	V	S	L	Q	A	E	K	L	V	Y	L	T	L	S	D	G	I	S	R	.	.	.	.	.	.	P	D	G	T	L	A	E	T	L	S	A	Q	E	A	Q	S	L	A	.	.	.	.	.	.	.	E	H	A	A	S	E	T	R	R	L	I	S	S	A	V	A	A
Template Known Secondary structure																	T	T		S							S	S	S	S		B		.	.	.	.	.	.	T	T	S		B		S												.	.	.	.	.	.	.	T	T	S
Template Predicted Secondary structure																																		.	.	.	.	.	.																			.	.	.	.	.	.	.
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.							.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.								.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		225	.	.	.	.		230	.	.	.	.	.	.	.	.	.	240	.	.		.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure							.														.
Query SS confidence							.														.
Query Sequence		C	R	A	G	I	.	D	T	I	I	A	A	G	S	K	P	G	V	I	.	G	D	V	M	E	G	I	S	V	G	T	L	F	H	A	Q	A
Query Conservation							.														.
Alig confidence							.														.
Template Conservation
Template Sequence		L	E	G	G	V	H	R	V	Q	I	L	N	G	A	A	D	G	S	L	L	Q	E	L	F	T	R	N	G	I	G	T	S	I	A	K	E	A
Template Known Secondary structure				T	T		S							T	T	S	T	T								S	S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions