 |
Job Description | P08839 | Confidence | 25.14% | Date | Thu Jan 5 11:01:38 GMT 2012 |
Rank | 180 | Aligned Residues | 91 |
% Identity | 13% | Template | d1y0ya2 |
SCOP info | Phosphorylase/hydrolase-like
| Zn-dependent exopeptidases
| Bacterial dinuclear zinc exopeptidases
|
Resolution | 1.60 |
|
 |
  |   |
483 | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | |
. | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
| . |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | L | I | K | Q | V | I | D | A | S | H | A | E | G | K | W | T | G | M | C | G | E | L | . |
A | G | D | E | R | A | T | L | L | L | L | G | M | G | L | D | E | F | S | M | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | I | S | I | P | R | I | K | K | I | I | R | N | T | N | F | E |
Query Conservation |   |
  |   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |
|   |
|
|
|
|   | . |
|   |
|
|   |   |   |   |   |
|
|   |
|
|
|   |   |
|
|
|   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |
|   |   |   |
|   |   |   |   |
|
|   |
|   |   |
|   |   |   |
|
|
|
|
|   |   |
|   |   |   |   |   |
|
|
|
|   |   |
|
|
|
|   |
|
|
|
|
|   |   |
|   |   |   |   |   |
|
|
|   |   |
|   |
|
|   |   |   |
|
|   |
|   |
|   |
Template Sequence |   |
T | I | V | R | W | L | E | E | L | A | K | K | H | E | I | P | Y | Q | L | E | I | L | L | G | G | G | T | D | A | G | A | I | H | L | T | K | A | G | V | P | T | G | A | L | S | V | P | A | R | Y | I | H | S | N | T | E | V | V | D | E | R | D | V | D | A | T | V | E | L | M | T | K | A | L | E | N | I | H | E | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |
| S | S |
|
|
| T |  |  |  |  | T | T | S | T | T |
|
|
|  |  |  |  |  |  |  |  | B | S |
| S | S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | G | G | G |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|  |  |  |  |  |
|
|
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
272 | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . |
  |
  |   |
544 | . | |
. | . | . | . | 550 | . | . | . | . | . | . | . | . | |
|
|
|
|
. | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . |
Predicted Secondary structure |   |
 |  | . |  |  |  |  |  |  |  |  |
|
|
|
|  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | A | . |
K | V | L | A | E | Q | A | L | A | Q | P | T | T | . |
. |
. |
. |
. |
D | E | L | M | T | L | V | N | K | F | I | E | E | K | T |
Query Conservation |   |
  |   | . |   |   |
|
|   |   |   |
|   |   |   |   |   | . | . | . | . | . |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
Alig confidence |   |
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|
|
|   |   |
|   |   |   |   |
|   |
|
|   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
Template Sequence |   |
M | V | D | Y | E | L | L | K | K | V | V | E | A | P | G | V | S | G | Y | E | F | L | G | I | R | D | V | V | I | E | E | I | K | D | Y | V |
Template Known Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  | S |
|
| B | T | T |
| G | G | G | T |  |  |  |  |  |  |  |  |  | G | G | G | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|