Return to main results Retrieve Phyre Job Id

Job DescriptionP08839
Confidence99.81%DateThu Jan 5 11:01:38 GMT 2012
Rank18Aligned Residues87
% Identity21%Templated1vbga2
SCOP infoThe "swivelling" beta/beta/alpha domain Phosphohistidine domain Pyruvate phosphate dikinase, central domain
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   148.150.........160.........170.........180.........190.........200....... ..210.....
Predicted Secondary structure 

























............



Query SS confidence 



























































. . . . . . . . . . . .







Query Sequence  DLSAIQDEVILVAADLTPSETAQLNLKKVLGFITDAGGRTSHTSIMARSLELPAIVGTGS. . . . . . . . . . . . VTSQVKND
Query Conservation           



  
 


   
    
 



  

 

















   ............    
  
Alig confidence 


























..






























............







Template Conservation           


     
     
  
.. 



  

 













 


               
   
  
Template Sequence  AWHSQGKAAILVRAETSPEDVGGMHAA. . VGILTERGGMTSHAAVVARGWGKCCVSGCSGIRVNDAEKLVTIGGHVLREG
Template Known Secondary structure  TT

S


TTSS..SSS

TTSTT



TTGGGTTTTT
Template Predicted Secondary structure 






..






























Template SS confidence 















































































   419420.........430.........440..... ....450.........460.........470.........480.........490......
 
   216...220.........230......
Predicted Secondary structure 







Query SS confidence 




















Query Sequence  DYLILDAVNNQVYVNPTNEVI
Query Conservation    




  
 
 
 
     
Alig confidence 




















Template Conservation    




  
 
  
   
 
Template Sequence  EWLSLNGSTGEVILGKQPLSP
Template Known Secondary structure 
TTTTS


B

Template Predicted Secondary structure 











Template SS confidence 




















   497..500.........510.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions