Job Description P08839 Confidence 100.00% Date Thu Jan 5 11:01:38 GMT 2012 Rank 10 Aligned Residues 285 % Identity 31% Template d1kbla1 SCOP info TIM beta/alpha-barrel Phosphoenolpyruvate/pyruvate domain Pyruvate phosphate dikinase, C-terminal domain Resolution 1.94

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		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	E	L	A	K	L	K	D	L	P	A	I	T	L	D	G	H	Q	V	E	V	C	A	N	I	G	T	V	R	D	V	E	G	A	E	R	N	G	A	E	G	V	G	L	Y	R	T	E	F	L	F	M	D	R	D	A	L	P	T	E	E	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.
Template Sequence		G	S	F	E	R	I	M	V	W	A	D	K	F	R	.	.	.	T	L	K	V	R	T	N	A	D	T	P	E	D	T	L	N	A	V	K	L	G	A	E	G	I	G	L	C	R	T	E	H	M	F	F	E	A	D	R	I	M	K	I	R	K	M	I	L	S	D	S	V	E	A	R	E	E	A	L	N	E	L	I
Template Known Secondary structure																.	.	.		S								S										T	T			S							T					S															S										T	T
Template Predicted Secondary structure																.	.	.
Template SS confidence
		519	520	.	.	.	.	.	.	.	.	.	530	.	.				.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.
				313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.																							350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	Q	F	A	A	Y	K	A	V	A	E	A	C	G	S	Q	A	V	I	V	R	T	M	D	I	G	G	D	K	E	L	P	Y	M	N	F	P	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	N	P	F	L	G	W	R	A	I	R	I	A	M	D	R	R	E
Query Conservation		.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	F	Q	K	G	D	F	K	A	M	Y	K	A	L	E	G	R	P	M	T	V	R	Y	L	D	P	P	L	H	E	F	V	P	H	T	E	E	E	Q	A	E	L	A	K	N	M	G	L	T	L	A	E	V	K	A	K	V	D	E	L	H	E	F	N	P	M	M	G	H	R	G	C	R	L	A	V	T	Y	P	E
Template Known Secondary structure																T	T										S		G	G	G	G	S			S												T																S		G	G	G	S	S		T
Template Predicted Secondary structure
Template SS confidence
		596	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.
		369	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.									.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440
Predicted Secondary structure																			.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.
Query Sequence		I	L	R	D	Q	L	R	A	I	L	R	A	S	A	F	G	K	.	.	.	.	.	.	.	.	L	R	I	M	F	P	M	I	I	S	V	E	E	V	R	A	L	R	K	E	I	E	I	Y	K	Q	E	L	R	D	E	G	K	A	F	D	E	S	I	E	I	G	V	M	V	E	T	P	A	A	A	T	I	A	R
Query Conservation																			.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.																																			.
Template Conservation																																																													.
Template Sequence		I	A	K	M	Q	T	R	A	V	M	E	A	A	I	E	V	K	E	E	T	G	I	D	I	V	P	E	I	M	I	P	L	V	G	E	K	K	E	L	K	F	V	K	D	V	V	V	E	V	A	E	Q	V	K	K	E	K	G	S	.	D	M	Q	Y	H	I	G	T	M	I	E	I	P	R	A	A	L	T	A	D
Template Known Secondary structure																																	S			S																							T		.												S						T
Template Predicted Secondary structure																																																													.
Template SS confidence
		676	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.		.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.
		441	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.														.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.			.	.	.	.	500	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.
Query Sequence		H	L	A	K	E	V	D	F	F	S	I	G	T	N	D	L	T	Q	Y	T	L	A	V	D	R	G	N	D	.	.	.	.	.	.	.	.	.	.	.	.	.	M	I	S	H	L	Y	Q	P	M	S	P	S	V	L	N	L	I	K	Q	V	I	D	A	S	H	A	E	.	.	G	K	W	T	G	M	C	G	E	L
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.
Template Conservation
Template Sequence		A	I	A	E	E	A	E	F	F	S	F	G	T	N	D	L	T	Q	M	T	F	G	F	S	R	D	D	A	G	K	F	L	D	S	Y	Y	K	A	K	I	Y	E	S	D	P	F	A	R	L	D	Q	T	G	V	G	Q	L	V	E	M	A	V	K	K	G	R	Q	T	R	P	G	L	K	C	G	I	C	G	E	H
Template Known Secondary structure				T	T	T		S															T																T	T	S		S	S		T	T	T	S			T	T	T																	T	T							S	G	G
Template Predicted Secondary structure
Template SS confidence
		755	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.
		506	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	D	E	R	A	T	L	L	L	L	G	M	G	L	D	E	F	S	M	S	A	I	S	I	P	R	I	K	K	I	I	R	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	G	D	P	S	S	V	E	F	C	H	K	V	G	L	N	Y	V	S	C	S	P	F	R	V	P	I	A	R	L	A	A	A	Q
Template Known Secondary structure		G	G	S										T	T		S						G	G	G
Template Predicted Secondary structure
Template SS confidence
		835	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions