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Job DescriptionP08839
Confidence100.00%DateThu Jan 5 11:01:38 GMT 2012
Rank8Aligned Residues293
% Identity28%Templated1h6za1
SCOP infoTIM beta/alpha-barrel Phosphoenolpyruvate/pyruvate domain Pyruvate phosphate dikinase, C-terminal domain
Resolution3.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   251........260.........270.........280.........290.........300.........310..
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Query Sequence  AELAKLKDLPAITLDGHQVEVCANIGTVRDVEGAERNGAEGVGLYRTEFLFMDRDALPTEEE. . . . . . . . . . . . . . . . . .
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Template Sequence  GSFQTILQWCQEMK. . . RLGVRTNADTPADAAKARSFGAEGVGLCRTEHMFFEGSRINFIREMILADSASGRKAALDKLL
Template Known Secondary structure  T
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SSTTT

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SGGGSTTTS
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   544.....550....... ..560.........570.........580.........590.........600.........610.........620
 
   313......320.........330.........340... ......350.........360........
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Query Sequence  . . QFAAYKAVAEACGSQAVIVRTMDIGGDKELP. . . . . . . . . . . . . . . . . . . . . . YMNFPKEENPFLGWRAIRIAMDRRE
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Template Sequence  PIQRADFVGILRAMRGLPVTIRLLDPPLHEFVPHDAAAQFELAQKLGMPAEKVRNRVNALHELNPMLGHRGCRLGITYPE
Template Known Secondary structure  TTTSSS



S
GGGG

SS
SSTTTTS
SSS

SS

SSSTTSS
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   621........630.........640.........650.........660.........670.........680.........690.........700
 
   369370.........380.... .....390.........400.........410.........420.........430.........440.
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Query Sequence  ILRDQLRAILRASAFG. . . . . . . KLRIMFPMIISVEEVRALRKEIEIYKQELRDEGKAFDESIEIGVMVETPAAATIARH
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Template Sequence  IYNMQVRAIIEAAIAVSEEGSSVIPEIMVPLVGKKEELSLIREEVVKTAEAVITKS. GKRVHYTVGTMIEVPRAAVTADS
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   701........710.........720.........730.........740.........750...... ...760.........770.........
 
   442.......450.........460......... 470.........480.........490..... ....500......
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Query Sequence  LAKEVDFFSIGTNDLTQYTLAVDRGNDM. . . . . . . . . . . . . ISHLYQPMSPSVLNLIKQVIDASHAE. . GKWTGMCGELA
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Template Sequence  IAQKADFFSFGTNDLTQMGCGFSRDDAGPFLRHYGNLGIYAQDPFQSIDQEGIGELVRIAVTKGRRVKPMLKMGICGEHG
Template Known Secondary structure  TTT
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TTT

GGG
TTTTTT
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TTTSTT

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   780.........790.........800.........810.........820.........830.........840.........850.........
 
   507..510.........520.........530.........540.......
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Query Sequence  GDERATLLLLGMGLDEFSMSAISIPRIKKIIRNTNFEDAKV
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Template Sequence  GDPATIGFCHKVGLDYVSCSPFRVPVAIVAAAHASIKDRRA
Template Known Secondary structure  G
T
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GGG
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   860.........870.........880.........890.........900
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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