 |
Job Description | P08839 | Confidence | 33.24% | Date | Thu Jan 5 11:01:38 GMT 2012 |
Rank | 154 | Aligned Residues | 94 |
% Identity | 11% | Template | d1f6da_ |
SCOP info | UDP-Glycosyltransferase/glycogen phosphorylase
| UDP-Glycosyltransferase/glycogen phosphorylase
| UDP-N-acetylglucosamine 2-epimerase
|
Resolution | 2.50 |
|
 |
  |   |
153 | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | |
. | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  | . |  |
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | D | E | V | I | L | V | A | A | D | L | T | P | S | E | T | A | Q | L | N | L | K | K | V | L | G | F | I | T | D | A | G | G | R | T | S | H | T | S | I | M | A | R | S | L | E | L | P | A | I | V | . |
G | T | G | S | V | T | S | Q | V | K | N | D | D | Y | L | I | L | D | A | V | N | N | Q | V | Y | V | N | P |
Query Conservation |   |
  |   |   |   |
|
|
|
|   |   |
|   |
|
|
|   |   |   |
|   |   |   |   |
|   |
|
|
|
|   |   |
|
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|   |   |   |   |   |   |   |
|   |   |
|   |   |
|
|
|
|
|   |   |
|   |
|   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
| . |
|
|
Template Conservation |   |
  |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   | . | . | . |
|
|
|   |   |   |   |
| . | . |
|   |   |   |
|
|
|   |
|   |
|   |
|
|
|   |   |   |   |   |
|   |   |   |   |
| . | . | . | . | . | . | . |   |   |   |   |   |
|   |
|
| . |   |   |
Template Sequence |   |
H | V | K | N | V | I | L | I | D | P | Q | E | Y | L | P | F | V | W | L | X | N | H | . |
. |
. |
A | W | L | I | L | T | D | S | . |
. |
G | G | I | Q | E | E | A | P | S | L | G | K | P | V | L | V | X | R | D | T | T | E | R | P | E | A | . |
. |
. |
. |
. |
. |
. |
V | T | A | G | T | V | R | L | V | . |
G | T |
Template Known Secondary structure |   |
T |
| T | T |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  | . | . | . |
| S |  |  |  |  | S | S | . | . | S | G | G | G | G | T | G | G | G | G | T |
|
|  |  |  |
| S | S |
|
| S |
|  |  |  | . | . | . | . | . | . | . |  |  |  | T | S |  |  |  |
| . |
| S |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
| . | . | . |
|
|  |  |  |
|
|
| . | . |
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |
| . |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
261 | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | |
|
|
. | . | . | . | . | . | . | 290 | |
|
. | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | |
|
|
|
|
|
|
. | . | . | 320 | . | . | . | . | . | |
. | . |
  |
  |   |
232 | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | N | E | V | I | D | K | M | R | A | V | Q | E | Q | V | A | S | E | K | A | E | L | A | K | L | K | D | L |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|
|   |
|
|   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
D | K | Q | R | I | V | E | E | V | T | R | L | L | K | D | E | N | E | Y | Q | A | X | S | R | A | H | N | P |
Template Known Secondary structure |   |
S |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  | S |
|
| T |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
328 | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|