Job Description P08839 Confidence 44.06% Date Thu Jan 5 11:01:38 GMT 2012 Rank 129 Aligned Residues 165 % Identity 12% Template d1d3ga_ SCOP info TIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases Resolution 1.60

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		391	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.		.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.
Query SS confidence																																																								.
Query Sequence		P	M	I	I	S	V	E	E	V	R	A	L	R	K	E	I	E	I	Y	K	Q	E	L	R	D	E	G	K	A	F	D	E	S	I	E	I	G	V	M	V	E	T	P	A	A	A	T	I	A	R	H	L	A	K	.	E	V	D	F	F	S	I	G	T	N	D	L	T	Q	Y	T	L	A	V	D	R	G	N	D	M
Query Conservation																																																								.
Alig confidence																																	.	.																						.						.
Template Conservation																																	.	.																												.
Template Sequence		A	G	L	G	K	A	E	L	R	R	L	L	T	K	V	L	Q	E	R	D	G	L	R	R	V	H	R	P	A	V	L	.	.	V	K	I	A	P	D	L	T	S	Q	D	K	E	D	I	A	S	V	V	K	E	L	G	I	D	G	L	.	I	V	T	N	T	T	V	S	R	P	A	G	L	Q	G	A	L	R	S
Template Known Secondary structure		T	T																			T	S		G	G	G						.	.					S																		T					.						B	S				T	T				T	T	T	T
Template Predicted Secondary structure																																	.	.																												.
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.			250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.		.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
		470	.	.	.	.			.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.
Predicted Secondary structure							.	.
Query SS confidence							.	.
Query Sequence		I	S	H	L	Y	.	.	Q	P	M	S	P	S	V	L	N	L	I	K	Q	V	I	D	A	S	H	A	E	G	K	W	T	G	M	C	G	E	L	A	G	D	E	R	A	T	L	L	L	L	G	M	G	L	D	E	F	S	M	S	A	I	S	I	P	R	I	K	K	I	I	R	N	T	N	F	E	D	A	K	V
Query Conservation							.	.
Alig confidence							.	.																					.													.																																	.
Template Conservation																													.													.																																	.
Template Sequence		E	T	G	G	L	S	G	K	P	L	R	D	L	S	T	Q	T	I	R	E	M	Y	A	L	T	Q	G	.	R	V	P	I	I	G	V	G	G	V	S	S	.	G	Q	D	A	L	E	K	I	R	A	G	A	S	L	V	Q	L	Y	T	A	L	T	F	W	G	P	P	V	V	G	K	V	.	K	R	E	L	E	A
Template Known Secondary structure		S	S	S					G	G	G															T	T	T	.		S						S	S			S	.											T		S					S								T							.
Template Predicted Secondary structure																													.													.																																	.
Template SS confidence
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.		.	.	.	330	.	.	.	.	.	.	.	.		.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370		.	.	.	.	.	.
		548	.	550	.	.	.	.	.	.	.	.	.	560	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	E	Q	A	L	A	Q	P	T	T	D	E	L	M
Query Conservation
Alig confidence						.
Template Conservation						.
Template Sequence		L	L	K	E	.	Q	G	F	G	G	V	T	D	A	I
Template Known Secondary structure						.	T	T		S	S					T
Template Predicted Secondary structure						.
Template SS confidence
		377	.	.	380		.	.	.	.	.	.	.	.	.	390

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions