Return to main results Retrieve Phyre Job Id

Job DescriptionP08839
Confidence99.54%DateThu Jan 5 11:01:38 GMT 2012
Rank23Aligned Residues82
% Identity18%Templatec3t07D_
PDB info PDB header:transferase/transferase inhibitorChain: D: PDB Molecule:pyruvate kinase; PDBTitle: crystal structure of s. aureus pyruvate kinase in complex with a2 naturally occurring bis-indole alkaloid
Resolution3.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   145....150.........160.........170.........180.........190.........200.........210.........220....
Predicted Secondary structure 




































Query SS confidence 















































































Query Sequence  KIIDLSAIQDEVILVAADLTPSETAQLNLKKVLGFITDAGGRTSHTSIMARSLELPAIVGTGSVTSQVKNDDYLILDAVN
Query Conservation              



  
 


   
    
 



  

 

















       
  
  




  
Alig confidence 





























..















































Template Conservation    
       
 


    
         
..  

 
  
 

  


 
  


 


       
  
  



   
Template Sequence  VKDLEGKDLSDKVIVTNSIDETFVPYVEKA. . LGLITEENGITSPSAIVGLEKGIPTVVGVEKAVKNISNNVLVTIDAAQ
Template Known Secondary structure  TTTTSSS

SSS


TTTTTS..SSS

TTST



TTS
SS
TTT
Template Predicted Secondary structure 












..




















Template SS confidence 















































































   497..500.........510.........520...... ...530.........540.........550.........560.........570....
 
   225...
Predicted Secondary structure 
Query SS confidence 



Query Sequence  NQVY
Query Conservation 
 
 
Alig confidence 



Template Conservation 
 

Template Sequence  GKIF
Template Known Secondary structure  T
Template Predicted Secondary structure 
Template SS confidence 



   575...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions