Job Description P08839 Confidence 98.67% Date Thu Jan 5 11:01:38 GMT 2012 Rank 37 Aligned Residues 151 % Identity 14% Template c3qllB_ PDB info PDB header:lyase Chain: B: PDB Molecule:citrate lyase; PDBTitle: crystal structure of ripc from yersinia pestis Resolution 2.45 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	I	A	M	D	R	R	E	I	L	R	D	Q	L	R	A	I	L	R	A	S	A	F	G	K	L	R	I	M	F	P	M	I	I	S	V	E	E	V	R	A	L	R	K	E	I	E	I	Y	K	Q	E	L	R	D	E	G	K	A	F	D	E	S	I	E	I	G	V	M	V	E	T	P	A	A	A	T	I	A
Query Conservation
Alig confidence																					.																													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.																													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	R	I	N	G	L	D	T	R	A	G	I	E	D	I	H	A	L	L	.	E	C	G	S	L	P	D	Y	L	V	L	P	K	T	E	S	A	A	H	L	Q	I	L	D	R	L	X	X	.	.	.	.	.	.	.	.	.	.	.	.	.	F	A	D	T	R	L	I	G	I	I	E	S	V	R	G	L	N	A	V
Template Known Secondary structure							T	T	S												.		S					S					S	S			S													.	.	.	.	.	.	.	.	.	.	.	.	.												S						T
Template Predicted Secondary structure																					.																													.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.														.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
		440	.	.	.	.	.	.	.				.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.			500	.	.	.	.				.	.	.	.	.	510	.
Predicted Secondary structure										.	.	.																																																					.	.						.	.	.
Query SS confidence										.	.	.																																																					.	.						.	.	.
Query Sequence		R	H	L	A	K	E	V	D	.	.	.	F	F	S	I	G	T	N	D	L	T	Q	Y	T	L	A	V	D	R	G	N	D	M	I	S	H	L	Y	Q	P	M	S	P	S	V	L	N	L	I	K	Q	V	I	D	A	S	H	A	E	G	K	W	T	.	.	G	M	C	G	E	.	.	.	L	A	G	D	E	R	A
Query Conservation										.	.	.																																																					.	.						.	.	.
Alig confidence										.	.	.													.													.	.	.	.	.	.	.	.	.	.	.																	.	.						.	.	.
Template Conservation																									.													.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	S	I	A	A	A	T	P	K	L	A	G	L	I	F	G	A	A	D	X	A	A	D	.	I	G	A	A	S	T	W	E	P	L	A	L	.	.	.	.	.	.	.	.	.	.	.	A	R	A	R	L	V	S	A	C	A	X	N	G	I	P	A	I	D	A	P	F	F	D	V	H	D	V	S	G	L	Q	S	E
Template Known Secondary structure						T	S		T	T															.		T			S	S	T	G	G	G			.	.	.	.	.	.	.	.	.	.	.													T									S		S	S
Template Predicted Secondary structure																									.													.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160		.	.	.	.	.	.	.	.	.	170	.	.												.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		512	.	.	.	.	.	.	.	520	.		.	.	.	.	.	.	.	.	530	.	.	.	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		T	L	L	L	L	G	M	G	L	D	.	E	F	S	M	S	A	I	S	I	P	R	I	K	K	I
Query Conservation												.
Alig confidence												.
Template Conservation
Template Sequence		T	L	R	A	S	D	F	G	F	S	A	K	A	A	I	H	P	A	Q	I	S	T	I	N	T	L
Template Known Secondary structure									T							S	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions