Job Description P08839 Confidence 98.12% Date Thu Jan 5 11:01:38 GMT 2012 Rank 40 Aligned Residues 214 % Identity 17% Template c3ma8A_ PDB info PDB header:transferase Chain: A: PDB Molecule:pyruvate kinase; PDBTitle: crystal structure of cgd1_2040, a pyruvate kinase from cryptosporidium2 parvum Resolution 2.64 Å

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		266	.	.	.	270	.	.	.	.	.					.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.										330	.	.
Predicted Secondary structure												.	.	.	.																																																							.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.																																																							.	.	.	.	.	.	.	.	.
Query Sequence		G	H	Q	V	E	V	C	A	N	I	.	.	.	.	G	T	V	R	D	V	E	G	A	E	R	N	G	A	E	G	V	G	L	Y	R	T	E	F	L	F	M	D	R	D	A	L	P	T	E	E	E	Q	F	A	A	Y	K	A	V	A	E	A	C	G	S	Q	A	V	.	.	.	.	.	.	.	.	.	I	V	R
Query Conservation												.	.	.	.																																																							.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.																			.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.
Template Sequence		Q	R	K	T	Q	I	I	C	T	I	G	P	S	C	N	N	V	E	S	L	I	G	L	I	D	K	G	M	S	V	A	R	.	.	.	.	.	.	L	N	F	S	H	G	D	H	E	S	H	F	K	T	L	Q	N	I	R	E	A	A	K	A	R	P	H	S	T	V	G	I	M	L	D	T	K	G	P	E	I	R
Template Known Secondary structure		T			S								G	G	G		S											T						.	.	.	.	.	.			T	T	S	S																			S	T	T	S											S			B
Template Predicted Secondary structure																																		.	.	.	.	.	.
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.							.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.																																																								.	350	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	M	D	I	G	G	D	K	E	L	P	Y	M	N	F	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	E	E	N	P	F	L	G	W
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	G	M	L	E	G	G	K	P	I	E	L	K	A	G	Q	K	I	T	T	D	Y	S	M	L	G	N	S	E	C	I	S	C	S	Y	S	L	L	P	K	S	V	Q	I	G	S	T	V	L	I	A	D	G	S	L	S	T	Q	V	L	E	I	G	D	D	F	I	V	C	K	V	L	N	S	V	T	I	G	E	R
Template Known Secondary structure		B				S	S	S	S						T	T					S			S	S				S	S				B	S		T	T							T	T						T	T	T	T										S	S								S						S	S
Template Predicted Secondary structure
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
		358	.	360	.	.	.				.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.		.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.
Predicted Secondary structure								.	.	.																								.
Query SS confidence								.	.	.																								.
Query Sequence		R	A	I	R	I	A	.	.	.	M	D	R	R	E	I	L	R	D	Q	L	R	A	I	L	R	A	S	A	F	G	K	L	.	R	I	M	F	P	M	I	I	S	V	E	E	V	R	A	L	R	K	E	I	E	I	Y	K	Q	E	L	R	D	E	G	K	A	F	D	E	S	I	E	I	G	V	M	V	E	T	P
Query Conservation								.	.	.																								.
Alig confidence								.	.	.																								.																							.	.	.	.
Template Conservation																																																									.	.	.	.
Template Sequence		K	N	M	N	L	P	G	C	K	V	H	L	P	I	I	G	D	K	D	R	H	D	I	V	D	F	A	L	K	Y	N	L	D	F	I	A	L	S	F	V	Q	N	G	A	D	V	Q	L	C	R	Q	I	I	S	E	.	.	.	.	N	T	Q	Y	S	N	G	I	P	S	S	I	K	I	I	S	K	I	E	N	L
Template Known Secondary structure			B				T	T					S		S	S										T	T	T	T	T	T	T		S						S			S														.	.	.	.			T	T	T	T	T													S
Template Predicted Secondary structure																																																									.	.	.	.
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.					.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
		434	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	A	T	I	A	R	H	L	A	K	E	V	D	F	F	S	I	G	T	N	D	L	T	Q	Y	T	L	A	V	D	R	G	N	D	M	I	S	H	L	Y	Q	P	M	S	P	S	V	L	N	L	I	K	Q	V	I	D	A	S	H	A	E	G	K	W	T	G	M	C	G	E	L
Query Conservation
Alig confidence																									.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	G	V	I	N	F	D	S	I	C	S	E	S	D	G	I	M	V	A	R	G	D	L	.	.	.	.	.	G	M	E	I	P	P	E	K	I	F	V	A	Q	K	.	.	.	.	.	.	.	.	.	.	.	C	M	I	S	K	C	N	V	A	G	K	P	V	V	T	A	T	Q	M
Template Known Secondary structure						T								S	S										.	.	.	.	.				S											.	.	.	.	.	.	.	.	.	.	.										T							S	S	S
Template Predicted Secondary structure																									.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.						.	.	.	.	310	.	.	.	.	.	.	.	.	.												320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions