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Job DescriptionP08839
Confidence30.57%DateThu Jan 5 11:01:38 GMT 2012
Rank163Aligned Residues147
% Identity17%Templatec3l0gD_
PDB info PDB header:transferaseChain: D: PDB Molecule:nicotinate-nucleotide pyrophosphorylase; PDBTitle: crystal structure of nicotinate-nucleotide pyrophosphorylase from2 ehrlichia chaffeensis at 2.05a resolution
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   318.320.........330.........340.........350.........360.........370.........380.........390.......
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Query Sequence  KAVAEACGSQAVIVRTMDIGGDKELPYMNFPKEENPFLGWRAIRIAMDRREILRDQLRAILRASAFGKLRIMFPMIISVE
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Template Sequence  RQFVDEVSGTKVKIRSTR. . . . KTTPGLRM. . . . . . . . . . . . . . . . . . . . . . . . LDKYSVCIGGGESYRDNLCDGVLIKD
Template Known Secondary structure  TTTSS


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   113......120.........130 ........ .140.........150.........160....
 
   398.400.........410.........420.........430.........440.........450.........460.........470.......
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Query Sequence  EVRALRKEIEIYKQELRDEGKAFDESIEIGVMVETPAAATIARHLAKEVDFFSIGTNDLTQYTLAVDRGNDMISHLYQPM
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Template Sequence  NHIASCGSITLAIQRLRKN. . . . LKNEYIAIECDNISQVEES. . LSNNVDMI. . . . . . . . . . . . . . . . . . . . . . . LLDNM
Template Known Secondary structure  S
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SS..TT
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   165....170.........180... ......190.........200.. .......210 .....
 
   478.480.........490.........500.........510.........520.......
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Query Sequence  SPSVLNLIKQVIDASHAEGKWTGMCGELAGDERATLLLLGMGLDEFSMSA
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Template Sequence  SISEIKKAVDIVN. . . . GKSVLEVSGCV. . NIRNVRNIALTGVDYISIGC
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   216...220........ .230......... 240.........250.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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