Job Description P08839 Confidence 98.06% Date Thu Jan 5 11:01:38 GMT 2012 Rank 41 Aligned Residues 205 % Identity 16% Template c3eoeC_ PDB info PDB header:transferase Chain: C: PDB Molecule:pyruvate kinase; PDBTitle: crystal structure of pyruvate kinase from toxoplasma gondii, 55.m00007 Resolution 2.31 Å

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		267	.	.	270	.	.	.	.	.					.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure											.	.	.	.
Query SS confidence											.	.	.	.
Query Sequence		H	Q	V	E	V	C	A	N	I	.	.	.	.	G	T	V	R	D	V	E	G	A	E	R	N	G	A	E	G	V	G	L	Y	R	T	E	F	L	F	M	D	R	D	A	L	P	T	E	E	E	Q	F	A	A	Y	K	A	V	A	E	A	C	G	S	Q	A	V	I	V	R	T	M	D	I	G	G	D	K	E	L
Query Conservation											.	.	.	.
Alig confidence											.	.	.	.																		.	.	.	.	.	.																																		.
Template Conservation																																.	.	.	.	.	.																																		.
Template Sequence		H	R	T	R	I	V	C	T	M	G	P	A	C	W	N	V	D	T	L	V	K	M	I	D	A	G	M	N	V	C	.	.	.	.	.	.	R	L	N	F	S	H	G	D	H	E	T	H	A	R	T	V	Q	N	I	Q	E	A	M	K	Q	R	P	E	A	R	L	A	I	.	L	L	D	T	K	G	P	E	I	R
Template Known Secondary structure				S							S	G	G	G		S											T					.	.	.	.	.	.				T	T	S																					T	T						.										B
Template Predicted Secondary structure																																.	.	.	.	.	.																																		.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.							.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.
		343	.	.	.	.	.																																																																				.	350	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	Y	M	N	F	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	E	E	N	P	F	L
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	G	F	L	K	D	H	K	P	I	T	L	Q	Q	G	A	T	L	K	I	V	T	D	Y	N	L	I	G	D	E	T	T	I	A	C	S	Y	G	A	L	P	Q	S	V	K	P	G	N	T	I	L	I	A	D	G	S	L	S	V	K	V	V	E	V	G	S	D	Y	V	I	T	Q	A	Q	N	T	A	T	I	G
Template Known Secondary structure		B			B	G	G	G							T	T							S		T	T			B		S	S				B	S		T	T							T	T						T	T	T	T										S	S							S	S
Template Predicted Secondary structure
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		356	.	.	.	360	.	.	.				.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.
Predicted Secondary structure										.	.	.																	.
Query SS confidence										.	.	.																	.
Query Sequence		G	W	R	A	I	R	I	A	.	.	.	M	D	R	R	E	I	L	R	D	Q	L	R	A	I	L	R	.	A	S	A	F	G	K	L	R	I	M	F	P	M	I	I	S	V	E	E	V	R	A	L	R	K	E	I	E	I	Y	K	Q	E	L	R	D	E	G	K	A	F	D	E	S	I	E	I	G	V	M	V	E
Query Conservation										.	.	.																	.
Alig confidence										.	.	.																	.																														.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	R	K	N	M	N	L	P	N	V	K	V	Q	L	P	V	I	G	E	K	D	K	H	D	I	L	N	F	G	I	P	M	G	C	N	F	I	A	A	S	F	V	Q	S	A	D	D	V	R	Y	I	R	G	L	L	G	P	.	.	.	.	.	.	.	.	.	.	.	R	G	R	H	I	R	I	I	P	K	I	E
Template Known Secondary structure		S	S		B				T	T					S		S	S											T	T	T	T	T	T							T	T			S												T	T	.	.	.	.	.	.	.	.	.	.	.	T	T	T	T
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.												.	.	.	.	250	.	.	.	.	.	.	.
		432	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	P	A	A	A	T	I	A	R	H	L	A	K	E	V	D	F	F	S	I	G	T	N	D	L	T	Q	Y	T	L	A	V	D	R	G	N	D	M	I	S	H	L	Y	Q	P	M	S	P	S	V	L	N	L	I	K	Q	V	I	D	A	S	H	A	E	G	K	W	T	G	M	C	G	E	L
Query Conservation
Alig confidence																											.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	V	E	G	L	V	N	F	D	E	I	L	A	E	A	D	G	I	M	I	A	R	G	D	L	.	.	.	.	.	G	M	E	I	P	P	E	K	V	F	L	A	Q	.	.	.	.	.	.	.	.	.	.	.	K	M	M	I	A	K	C	N	V	V	G	K	P	V	I	T	A	T	Q	M
Template Known Secondary structure		S						T									S										.	.	.	.	.	T	T	T	S		G	G	G						.	.	.	.	.	.	.	.	.	.	.										T	T							S	S	S
Template Predicted Secondary structure																											.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.						.	.	.	.	.	.	.	290	.	.	.	.	.												.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions