Return to main results Retrieve Phyre Job Id

Job DescriptionP08839
Confidence32.40%DateThu Jan 5 11:01:38 GMT 2012
Rank157Aligned Residues88
% Identity13%Templatec3cz8A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:putative sporulation-specific glycosylase ydhd; PDBTitle: crystal structure of putative sporulation-specific glycosylase ydhd2 from bacillus subtilis
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   367..370.........380.........390.........400.........410.........420........ .430.........440.....
Predicted Secondary structure 

















.
Query SS confidence 





























































.
















Query Sequence  REILRDQLRAILRASAFGKLRIMFPMIISVEEVRALRKEIEIYKQELRDEGKAFDESIEIGV. MVETPAAATIARHLAKE
Query Conservation    

  







   
 
 

 


    
              
   
         
 .






          
Alig confidence 


























.

































.
















Template Conservation 
  

  

  
     







  .          

  

  
      


 
                  
   
Template Sequence  RTNLVNNIYDLVSTRGYGGVTIDFEQV. SAADRDLFTGFLRQLRDRLQAGGYVLTIAVPAKTSDNIPWLRGYDYGGIGAV
Template Known Secondary structure  T
S

S
.
GGGTT


S
S

GGGTT

Template Predicted Secondary structure 







.
















Template SS confidence 















































































   188.190.........200.........210.... .....220.........230.........240.........250.........260......
 
   446...450.....
Predicted Secondary structure 



Query SS confidence 









Query Sequence  VDFFSIGTND
Query Conservation   

 





Alig confidence 









Template Conservation 

 
 




Template Sequence  VNYMFIMAYD
Template Known Secondary structure 
S


Template Predicted Secondary structure 




Template SS confidence 









   267..270......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions