Job Description P08839 Confidence 31.89% Date Thu Jan 5 11:01:38 GMT 2012 Rank 160 Aligned Residues 77 % Identity 17% Template c3cyvA_ PDB info PDB header:lyase Chain: A: PDB Molecule:uroporphyrinogen decarboxylase; PDBTitle: crystal structure of uroporphyrinogen decarboxylase from2 shigella flexineri: new insights into its catalytic3 mechanism Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		481	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.						.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.
Query SS confidence																				.	.	.	.	.
Query Sequence		V	L	N	L	I	K	Q	V	I	D	A	S	H	A	E	G	K	W	.	.	.	.	.	T	G	M	C	G	E	L	A	G	D	E	R	A	T	L	L	L	L	G	M	G	L	D	E	F	S	M	S	A	I	S	I	P	R	I	K	K	I	I	R	N	T	N	F	E	D	A	K	V	L	A	E	Q	A	L	A	Q
Query Conservation																				.	.	.	.	.
Alig confidence																				.	.	.	.	.						.	.	.																						.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.																						.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	L	Y	Y	M	H	K	I	V	D	G	L	L	R	E	N	D	G	R	R	V	P	V	T	L	F	T	K	.	.	.	G	G	G	Q	W	L	E	A	M	A	E	T	G	C	D	A	L	G	L	D	W	.	.	.	.	.	.	.	.	.	.	.	T	T	D	I	A	D	A	R	R	R	V	G	N	K	V	A	L
Template Known Secondary structure		T											S		S			T	T										T	.	.	.	T	T	T	T	T						T	T	S		S						T	.	.	.	.	.	.	.	.	.	.	.	T	S										T	T	T	S
Template Predicted Secondary structure																														.	.	.																						.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250				.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.												.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
		556											.	.	.	560	.	.	.	.	.	.	.	.	.	570	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.
Query Sequence		P	.	.	.	.	.	.	.	.	.	.	T	T	D	E	L	M	T	L	V	N	K	F	I	E	E
Query Conservation			.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	G	N	M	D	P	S	M	L	Y	A	P	P	A	R	I	E	E	E	V	A	T	I	L	A	G
Template Known Secondary structure					B		G	G	G	G	G	S														T	T
Template Predicted Secondary structure
Template SS confidence
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions