Job Description P08839 Confidence 98.75% Date Thu Jan 5 11:01:38 GMT 2012 Rank 36 Aligned Residues 259 % Identity 13% Template c3cuzA_ PDB info PDB header:transferase Chain: A: PDB Molecule:malate synthase a; PDBTitle: atomic resolution structures of escherichia coli and2 bacillis anthracis malate synthase a: comparison with3 isoform g and implications for structure based drug design Resolution 1.04 Å

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		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	I	T	L	D	G	H	Q	V	E	V	C	A	N	I	G	T	V	R	D	V	E	G	A	E	R	N	G	A	E	G	V	G	L	Y	R	T	E	F	L	F	M	D	R	D	A	L	P	T	E	E	E	Q	F	A	A	Y	K	A	V	A	E	A	C	G	S	Q	A	V	I	V	R	T	M	D	I	G	G	D
Query Conservation
Alig confidence																	.																		.	.	.	.	.	.																													.	.	.	.	.	.
Template Conservation																	.																		.	.	.	.	.	.																													.	.	.	.	.	.
Template Sequence		I	P	A	D	L	E	D	R	R	V	E	I	T	G	P	.	V	E	R	K	M	V	I	N	A	L	N	A	N	V	K	V	F	.	.	.	.	.	.	M	A	D	F	E	D	S	L	A	P	D	W	N	K	V	I	D	G	Q	I	N	L	R	D	A	V	N	G	.	.	.	.	.	.	T	I	S	Y	T	N	E
Template Known Secondary structure				G	G	G	S			S							.											T	S	S	S	S			.	.	.	.	.	.				S	S	T	T																				T	T	.	.	.	.	.	.							T
Template Predicted Secondary structure																	.																		.	.	.	.	.	.																													.	.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.		.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.							.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.							.	.	.	.	.	.	.
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.										.	.	.	370	.	.	.	.	.	.	.	.	.	380	.					.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.																.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.																.	.	.	.
Query Sequence		K	E	L	P	Y	M	N	F	P	K	E	E	N	P	F	L	G	W	R	A	I	R	I	A	M	D	R	.	.	.	.	.	.	.	.	.	R	E	I	L	R	D	Q	L	R	A	I	L	R	A	S	.	.	.	.	A	F	G	K	L	R	I	M	F	P	M	I	I	S	V	E	E	V	R	A	L	R	K	E	I
Query Conservation																													.	.	.	.	.	.	.	.	.																.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.																.	.	.	.
Template Conservation
Template Sequence		A	G	K	I	Y	Q	L	K	P	N	P	A	V	L	I	C	R	V	R	G	L	H	L	P	E	K	H	V	T	W	R	G	E	A	I	P	G	S	L	F	D	F	A	L	Y	F	F	H	N	Y	Q	A	L	L	A	K	G	S	G	P	Y	F	Y	L	P	K	T	Q	S	W	Q	E	A	A	W	W	S	E	V	F
Template Known Secondary structure		T	S							S	S											T	T									T	T																								T	T
Template Predicted Secondary structure
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		407	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.					.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.						.
Predicted Secondary structure																																							.	.	.	.																																		.	.	.	.	.
Query SS confidence																																							.	.	.	.																																		.	.	.	.	.
Query Sequence		E	I	Y	K	Q	E	L	R	D	E	G	K	A	F	D	E	S	I	E	I	G	V	M	V	E	T	P	A	A	A	T	I	A	R	H	L	A	.	.	.	.	K	E	V	D	F	F	S	I	G	T	N	D	L	T	Q	Y	T	L	A	V	D	R	G	N	D	M	I	S	H	L	Y	Q	P	.	.	.	.	.	M
Query Conservation																																							.	.	.	.																																		.	.	.	.	.
Alig confidence								.	.	.								.																					.	.	.	.															.																			.	.	.	.	.
Template Conservation								.	.	.								.																																							.
Template Sequence		S	Y	A	E	D	R	.	.	.	F	N	L	P	R	G	T	.	I	K	A	T	L	L	I	E	T	L	P	A	V	F	Q	M	D	E	I	L	H	A	L	R	D	H	I	V	G	L	N	C	G	R	W	D	Y	I	.	F	S	Y	I	K	T	L	K	N	Y	P	D	R	V	L	P	D	R	Q	A	V	T	M	D
Template Known Secondary structure								.	.	.	T	T			T	T		.	S								S					T	S								T	T	T	T								S					.							T	T	T		G	G	G					G	G	G			T	T
Template Predicted Secondary structure								.	.	.								.																																							.
Template SS confidence
		230	.	.	.	.	.				.	.	.	.	240	.	.		.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280		.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
		478	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.								.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.								.	.	520	.		.	.	.	.	.	.	.	.	530	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.																	.	.	.	.	.	.	.					.
Query SS confidence																										.	.	.	.	.	.	.																	.	.	.	.	.	.	.					.
Query Sequence		S	P	S	V	L	N	L	I	K	Q	V	I	D	A	S	H	A	E	G	K	W	T	G	M	.	.	.	.	.	.	.	C	G	E	L	A	G	D	E	R	A	T	L	L	L	L	G	.	.	.	.	.	.	.	M	G	L	D	.	E	F	S	M	S	A	I	S	I	P	R	I	K	K	I
Query Conservation																										.	.	.	.	.	.	.																	.	.	.	.	.	.	.					.
Alig confidence																										.	.	.	.	.	.	.																	.	.	.	.	.	.	.					.
Template Conservation
Template Sequence		K	P	F	L	N	A	Y	S	R	L	L	I	K	T	C	H	K	R	G	A	F	A	M	G	G	M	A	A	F	I	P	S	K	D	E	E	H	N	N	Q	V	L	N	K	V	K	A	D	K	S	L	E	A	N	N	G	H	D	G	T	W	I	A	H	P	G	L	A	D	T	A	M	A	V
Template Known Secondary structure		S																	T	T										B				S	S	G	G	G																			T		S					S	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions