Job Description P08839 Confidence 82.93% Date Thu Jan 5 11:01:38 GMT 2012 Rank 71 Aligned Residues 90 % Identity 21% Template c2yzrB_ PDB info PDB header:lyase Chain: B: PDB Molecule:pyridoxal biosynthesis lyase pdxs; PDBTitle: crystal structure of pyridoxine biosynthesis protein from2 methanocaldococcus jannaschii Resolution 2.30 Å

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		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.					.	.	.	.	.	.	220	.	.	.	.	.	.																			.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	S	L	E	L	P	A	I	V	G	T	G	S	V	T	S	Q	V	K	.	.	.	.	N	D	D	Y	L	I	L	D	A	V	N	N	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	Y	V	N	P	T	N	E	V	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																					.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	K	F	N	V	P	F	V	C	G	A	R	N	L	G	E	A	V	R	R	I	W	E	G	A	A	M	I	R	T	K	G	E	A	G	T	G	N	I	V	E	A	V	R	H	M	R	L	M	N	E	A	I	A	Q	L	Q	R	M	T	D	E	E	V	Y	G	V	A	K	F	Y	A	N	R	Y	A	E	L	A	K
Template Known Secondary structure		G	G		S	S							S	S										T	T		S								T	T	S			T																		T	T	S														G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
																							237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.			.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	K	M	R	A	V	Q	E	Q	V	A	S	E	K	A	E	L	A	K	L	K	D	L	P	A	I	T	L	D	G	H	Q	V	E	V	C	A	.	.	N	I	G	T	V	R	D	V	E	G	A	E	R	N	G	A	E	G	V
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.				.	.
Template Conservation																																																	.	.	.	.	.	.	.	.
Template Sequence		T	V	R	E	G	M	G	L	P	A	T	V	L	E	N	E	P	I	Y	E	G	F	T	L	A	E	I	I	D	G	L	Y	E	V	L	L	E	V	K	K	L	G	R	L	P	V	V	.	.	.	.	.	.	.	.	N	F	A	A	G	G	V	A	T	P	A	D	A	A	L	M	M	Q	L	G	S	D	G	V
Template Known Secondary structure							T	T	S		S				T	T	S				T	T																					T	S		S	S		.	.	.	.	.	.	.	.					S				S										T	T		S
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.									.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions