Job Description P08839 Confidence 98.28% Date Thu Jan 5 11:01:38 GMT 2012 Rank 39 Aligned Residues 204 % Identity 18% Template c2vgbB_ PDB info PDB header:transferase Chain: B: PDB Molecule:pyruvate kinase isozymes r/l; PDBTitle: human erythrocyte pyruvate kinase Resolution 2.73 Å

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		267	.	.	270	.	.	.	.	.					.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.						.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.																																																			.	.	.	.	.
Query SS confidence											.	.	.	.																																																			.	.	.	.	.
Query Sequence		H	Q	V	E	V	C	A	N	I	.	.	.	.	G	T	V	R	D	V	E	G	A	E	R	N	G	A	E	G	V	G	L	Y	R	T	E	F	L	F	M	D	R	D	A	L	P	T	E	E	E	Q	F	A	A	Y	K	A	V	A	E	A	C	G	.	.	.	.	.	S	Q	A	V	I	V	R	T	M	D	I	G
Query Conservation											.	.	.	.																																																			.	.	.	.	.
Alig confidence											.	.	.	.																			.	.	.	.	.	.																											.	.	.	.	.							.
Template Conservation																																	.	.	.	.	.	.																																						.
Template Sequence		R	S	T	S	I	I	A	T	I	G	P	A	S	R	S	V	E	R	L	K	E	M	I	K	A	G	M	N	I	A	R	.	.	.	.	.	.	L	N	F	S	H	G	S	H	E	Y	H	A	E	S	I	A	N	V	R	E	A	V	E	S	F	A	G	S	P	L	S	Y	R	P	V	A	I	.	A	L	D	T	K
Template Known Secondary structure				S							S	G	G	G		S											T						.	.	.	.	.	.			T	T	S	S																		T	T	T	T		T	T	T							.
Template Predicted Secondary structure																																	.	.	.	.	.	.																																						.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.							.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.		.	.	.	.	.
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	D	K	E	L	P	Y	M	N	F	P	K	E	E	N	P	F	L	G	W	R	A	I	R	I	A	M	D	R	R	E	I	L	R	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.
Template Sequence		G	P	E	I	R	T	G	I	V	E	L	V	K	G	S	Q	V	L	V	T	A	N	.	T	V	W	V	D	Y	P	N	I	V	R	V	V	P	V	G	G	R	I	Y	I	D	D	G	L	I	S	L	V	V	V	T	Q	V	E	N	G	G	V	L	G	S	R	K	G	V	N	L	P	G	A	Q	V	D	L	P	G
Template Known Secondary structure			S			B	B							T	T									.				B	S		T	T							T	T						T	T	T	T																	S	S		B				S	S	S				S		S
Template Predicted Secondary structure																								.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
						373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	Q	L	R	A	I	L	R	A	S	A	F	G	K	L	R	I	M	F	P	M	I	I	S	V	E	E	V	R	A	L	R	K	E	I	E	I	Y	K	Q	E	L	R	D	E	G	K	A	F	D	E	S	I	E	I	G	V	M	V	E	T	P	A	A	A	T	I	A	R	H	L	A	K	E	V	D	F
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	S	E	Q	D	V	R	D	L	R	F	G	V	E	H	G	V	D	I	V	F	A	S	F	V	R	K	A	S	D	V	A	A	V	R	A	A	L	G	P	.	.	.	.	.	.	.	.	.	.	.	E	G	H	G	I	K	I	I	S	K	I	E	N	H	E	G	V	K	R	F	D	E	I	L	E	V	S	D	G
Template Known Secondary structure		S														T	T							T	T			S													G	.	.	.	.	.	.	.	.	.	.	.	G	G	S	S	S								S						T								S	S
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.												.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
		449	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	S	I	G	T	N	D	L	T	Q	Y	T	L	A	V	D	R	G	N	D	M	I	S	H	L	Y	Q	P	M	S	P	S	V	L	N	L	I	K	Q	V	I	D	A	S	H	A	E	G	K	W	T	G	M	C	G	E	L
Query Conservation
Alig confidence										.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	M	V	A	R	G	D	L	.	.	.	.	.	G	I	E	I	P	A	E	K	V	F	L	A	Q	.	.	.	.	.	.	.	.	.	.	.	K	M	M	I	G	R	C	N	L	A	G	K	P	V	V	C	A	T	Q	M
Template Known Secondary structure										.	.	.	.	.				S		G	G	G						.	.	.	.	.	.	.	.	.	.	.											T							S		T
Template Predicted Secondary structure										.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		333	.	.	.	.	.	.	340						.	.	.	.	.	.	.	.	.	350	.	.	.												.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions