Return to main results Retrieve Phyre Job Id

Job DescriptionP08839
Confidence75.21%DateThu Jan 5 11:01:38 GMT 2012
Rank76Aligned Residues83
% Identity17%Templatec2e77B_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:lactate oxidase; PDBTitle: crystal structure of l-lactate oxidase with pyruvate complex
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   157..160.........170.........180.........190.........200.........210.........220.........230......
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  ILVAADLTPSETAQLNLKKVLGFITDAGGRTSHTSIMARSLELPAIVGTGSVTSQVKNDDYLILDAVNNQVYVNPTNEVI
Query Conservation 



  
 


   
    
 



  

 

















       
  
  




  
 
 
 
     
Alig confidence 
































......


























..............
Template Conservation 





    

  
   


 
 






 
......
        
  
  

   
 

 

..............
Template Sequence  VFVKGIQHPEDADMAIKRGASGIWVSNHGARQL. . . . . . YEAPGSFDTLPAIAERVNKRVPIVFDS. . . . . . . . . . . . . .
Template Known Secondary structure 
STT
S

GGGTSS......SS


TTSS

S..............
Template Predicted Secondary structure 















......










..............
Template SS confidence 















































































   1238.1240.........1250.........1260.........1270 .........1280.........1290.......
 
   237..240.........250.........260.........270.........280.........290......
Predicted Secondary structure 

















Query SS confidence 



























































Query Sequence  DKMRAVQEQVASEKAELAKLKDLPAITLDGHQVEVCANIGTVRDVEGAERNGAEGVGLYR
Query Conservation                         
  
 

  
 
 


    
   
   

 



 
Alig confidence  .....................................






















Template Conservation  .....................................


 
 

 









 


Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GVRRGEHVAKALASGADVVALGR
Template Known Secondary structure  .....................................S

STT
S
Template Predicted Secondary structure  .....................................







Template SS confidence 



























































   1298.1300.........1310.........1320
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions