Job Description P08839 Confidence 100.00% Date Thu Jan 5 11:01:38 GMT 2012 Rank 6 Aligned Residues 454 % Identity 24% Template c1vbhA_ PDB info PDB header:transferase Chain: A: PDB Molecule:pyruvate,orthophosphate dikinase; PDBTitle: pyruvate phosphate dikinase with bound mg-pep from maize Resolution 2.30 Å

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		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.						.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.												110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure																													.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	E	K	E	A	I	F	E	G	H	I	M	L	L	E	D	E	E	L	E	Q	E	I	I	A	L	I	.	.	.	.	.	K	D	K	H	M	T	A	D	A	A	A	H	E	V	I	E	.	.	.	.	.	.	.	.	.	.	.	G	Q	A	S	A	L	E	E	L	D	D	E	Y	L	K	E	R	A	A	D	V
Query Conservation																													.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.					.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.
Template Sequence		V	E	N	C	N	I	L	E	S	H	Y	K	E	M	Q	D	I	E	F	T	V	Q	.	E	N	R	L	W	M	L	Q	C	R	T	G	K	R	T	G	K	S	A	V	K	I	A	V	D	M	V	N	E	G	L	V	E	P	R	S	A	I	K	M	V	E	P	G	H	L	D	Q	L	L	H	P	Q	F	E	N	P
Template Known Secondary structure														S										.	T	T																											T	T	S	S						G	G	G	S								T	T	S			B	S		T
Template Predicted Secondary structure																								.
Template SS confidence
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330		.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
		131	.	.	.	.	.	.	.	.															140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	D	I	G	K	R	L	L	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	I	L	G	L	K	I	I	D	L	S	A	I	Q	D	E	V	I	L	V	A	A	D	L	T	P	S	E	T	A	Q	L	N	L	K	K	V	L	G	F	I	T	D	A	G	G	R	T	S	H	T	S	I	M	A	R	S
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.							.	.	.
Template Conservation																																																												.	.							.	.	.
Template Sequence		S	A	Y	K	D	Q	V	I	A	T	G	L	P	A	S	P	G	A	A	V	G	Q	V	V	F	T	A	E	D	A	E	A	W	H	S	Q	G	K	A	A	I	L	V	R	A	E	T	S	P	E	D	V	G	G	M	H	A	A	.	.	V	G	I	L	T	E	.	.	.	M	T	S	H	A	A	V	V	A	R	G
Template Known Secondary structure		T	T	T	G	G	G																				S										T	T								S	S			T	T	T							S	.	.	S						.	.	.			S
Template Predicted Secondary structure																																																												.	.							.	.	.
Template SS confidence
		388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.			.	.	.	.	450	.				.	.	.	.	.	.	.	.	460	.	.
		197	.	.	200	.	.	.	.	.	.	.													.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	E	L	P	A	I	V	G	T	G	S	.	.	.	.	.	.	.	.	.	.	.	.	V	T	S	Q	V	K	N	D	D	Y	L	I	L	D	A	V	N	N	Q	V	Y	V	N	P	T	N	E	V	I	D	K	M	R	A	V	Q	E	Q	V	A	S	E	K	A	E	L	A	K	L	K	D	L	P	A	I	T	L
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		W	G	K	C	C	V	S	G	C	S	G	I	R	V	N	D	A	E	K	L	V	T	I	G	G	H	V	L	R	E	G	E	W	L	S	L	N	G	S	T	G	E	V	I	L	G	K	Q	P	L	S	P	P	A	L	S	G	D	L	G	T	F	M	A	W	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D
Template Known Secondary structure			T									S					T	T	T	T					T	T					T	T							T	T	T					B	S				B						S										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		466	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530														.	.
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.																						310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	G	H	Q	V	E	V	C	A	N	I	G	T	V	R	D	V	E	G	A	E	R	N	G	A	E	G	V	G	L	Y	R	T	E	F	L	F	M	D	R	D	A	L	P	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	E	Q	F	A	A	Y	K	A	V	A	E	A
Query Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	V	R	K	L	K	V	L	A	N	A	D	T	P	D	D	A	L	T	A	R	N	N	G	A	Q	G	I	G	L	C	R	T	E	H	M	F	F	A	S	D	E	R	I	K	A	V	R	Q	M	I	M	A	P	T	L	E	L	R	Q	Q	A	L	D	R	L	L	P	Y	Q	R	S	D	F	E	G	I	F	R	A
Template Known Secondary structure						S								S										T	T			S						G	G	G	G	T	T	T															S	S
Template Predicted Secondary structure
Template SS confidence
		533	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.																									.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		C	G	S	Q	A	V	I	V	R	T	M	D	I	G	G	D	K	E	L	P	Y	M	N	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	K	E	E	N	P	F	L	G	W	R	A	I	R	I	A	M	D	R	R	E	I	L	R	D	Q	L	R	A	I	L	R
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	D	G	L	P	V	T	I	R	L	L	D	P	P	L	H	E	F	L	P	E	G	N	I	E	D	I	V	S	E	L	C	A	E	T	G	A	N	Q	E	D	A	L	A	R	I	E	K	L	S	E	V	N	P	M	L	G	F	R	G	C	R	L	G	I	S	Y	P	E	L	T	E	M	Q	A	R	A	I	F	E
Template Known Secondary structure		T	T	T	S									S		G	G	G	G	S			S																														S		G	G	G	S	S		T
Template Predicted Secondary structure
Template SS confidence
		613	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.
		380	.	.								.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.
Predicted Secondary structure					.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.
Query Sequence		A	S	A	.	.	.	.	.	.	.	F	G	K	L	R	I	M	F	P	M	I	I	S	V	E	E	V	R	A	L	R	K	E	I	E	I	Y	K	Q	E	L	R	D	E	G	K	A	F	D	E	S	I	E	I	G	V	M	V	E	T	P	A	A	A	T	I	A	R	H	L	A	K	E	V	D	F	F	S	I	G
Query Conservation					.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.																																		.
Template Conservation																																													.
Template Sequence		A	A	I	A	M	T	N	Q	G	V	Q	V	F	P	E	I	M	V	P	L	V	G	T	P	Q	E	L	G	H	Q	V	T	L	I	R	Q	V	A	E	K	V	F	A	.	N	V	G	K	T	I	G	Y	K	V	G	T	M	I	E	I	P	R	A	A	L	V	A	D	E	I	A	E	Q	A	E	F	F	S	F	G
Template Known Secondary structure								T	T	T											S			S																					.		T	T													S						T					T	T	T		S
Template Predicted Secondary structure																																													.
Template SS confidence
		693	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.		.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.
		453	.	.	.	.	.	.	460	.	.	.	.	.	.	.							.	.	470	.	.	.	.	.	.	.	.	.								480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.			.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.													.	.	.	.	.	.	.																	.	.
Query SS confidence																	.	.	.	.	.	.													.	.	.	.	.	.	.																	.	.
Query Sequence		T	N	D	L	T	Q	Y	T	L	A	V	D	R	G	N	.	.	.	.	.	.	D	M	I	S	H	L	Y	Q	P	M	S	P	.	.	.	.	.	.	.	S	V	L	N	L	I	K	Q	V	I	D	A	S	H	A	E	.	.	G	K	W	T	G	M	C	G	E	L	A	G	D	E	R	A	T	L	L	L	L	G
Query Conservation																	.	.	.	.	.	.													.	.	.	.	.	.	.																	.	.
Alig confidence																	.	.	.	.	.	.													.	.	.	.	.	.	.																	.	.
Template Conservation
Template Sequence		T	N	D	L	T	Q	M	T	F	G	Y	S	R	D	D	V	G	K	F	I	P	V	Y	L	A	Q	G	I	L	Q	H	D	P	F	E	V	L	D	Q	R	G	V	G	E	L	V	K	F	A	T	E	R	G	R	K	A	R	P	N	L	K	V	G	I	C	G	E	H	G	G	E	P	S	S	V	A	F	F	A	K
Template Known Secondary structure											T							T	T	T							T	T	S		S	S		T	T	T	S			T	T	T																S	T	T							S	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		772	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.
		518	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540
Predicted Secondary structure
Query SS confidence
Query Sequence		M	G	L	D	E	F	S	M	S	A	I	S	I	P	R	I	K	K	I	I	R	N	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	G	L	D	Y	V	S	C	S	P	F	R	V	P	I	A	R	L	A	A	A	Q	V
Template Known Secondary structure			T		S						G	G	G											T
Template Predicted Secondary structure
Template SS confidence
		852	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.