Job Description P08839 Confidence 98.97% Date Thu Jan 5 11:01:38 GMT 2012 Rank 34 Aligned Residues 201 % Identity 18% Template c1u5vA_ PDB info PDB header:lyase Chain: A: PDB Molecule:cite; PDBTitle: structure of cite complexed with triphosphate group of atp2 form mycobacterium tuberculosis Resolution 1.85 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.		.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.
Query SS confidence																																																							.
Query Sequence		V	C	A	N	I	G	T	V	R	D	V	E	G	A	E	R	N	G	A	E	G	V	G	L	Y	R	T	E	F	L	F	M	D	R	D	A	L	P	T	E	E	E	Q	F	A	A	Y	K	A	V	A	E	A	.	C	G	S	Q	A	V	I	V	R	T	M	D	I	G	G	D	K	E	L	P	Y	M	N	F	P	K
Query Conservation																																																							.
Alig confidence																.								.	.	.	.	.	.																		.	.							.																.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.								.	.	.	.	.	.																		.	.																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	F	C	P	A	D	A	P	E	A	F	A	A	A	.	A	A	A	A	D	V	V	.	.	.	.	.	.	I	L	D	L	E	D	G	V	A	A	A	Q	K	P	A	A	R	.	.	N	A	L	R	D	T	P	L	D	P	E	R	T	V	V	R	I	N	A	G	G	T	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure						T	T		G	G	G					.					S			.	.	.	.	.	.				S	S	T	T	S		G	G	G						.	.						S				G	G	G								T	T		.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																.								.	.	.	.	.	.																		.	.																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.							.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.			.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	N	P	F	L	G	W	R	A	I	R	I	A	M	D	R	R	E	I	L	R	D	Q	L	R	A	I	L	R	A	S	A	F	G	K	L	R	I	M	F	P	M	I	I	S	V	E	E	V	R	A	L	R	K	E	I	E	I	Y	K	Q	E	L	R	D	E	G	K	A	F	D	E	S	I	E	I	G	V	M
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	Q	A	R	D	L	E	A	L	A	G	T	A	Y	T	T	V	M	L	P	K	A	E	S	A	A	Q	V	I	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	P	R	D	V	I	A	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												T	S								T	T									T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																							71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.																				.	.	.	.	.	.	.	110
		430	.	.	.	.	.	.	.	.	.	440	.	.	.	.			.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.			500	.	.	.
Predicted Secondary structure																	.	.																																																								.	.					.	.
Query SS confidence																	.	.																																																								.	.					.	.
Query Sequence		V	E	T	P	A	A	A	T	I	A	R	H	L	A	K	.	.	E	V	D	F	F	S	I	G	T	N	D	L	T	Q	Y	T	L	A	V	D	R	G	N	D	M	I	S	H	L	Y	Q	P	M	S	P	S	V	L	N	L	I	K	Q	V	I	D	A	S	H	A	E	G	K	W	T	.	.	G	M	C	G	.	.
Query Conservation																	.	.																																																								.	.					.	.
Alig confidence																	.	.														.												.	.	.	.																											.	.					.	.
Template Conservation																																.												.	.	.	.
Template Sequence		V	E	T	A	R	G	A	V	C	A	A	E	I	A	A	A	D	P	T	V	G	M	M	W	G	A	E	D	L	I	.	A	T	L	G	G	S	S	S	R	R	A	.	.	.	.	D	G	A	Y	R	D	V	A	R	H	V	R	S	T	I	L	L	A	A	S	A	F	G	R	L	A	L	D	A	V	H	L	D	I
Template Known Secondary structure				S						T							S	T	T													.				T		S		S	B		T	.	.	.	.	T	S		B																		T	T									S		T
Template Predicted Secondary structure																																.												.	.	.	.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140		.	.	.	.	.	.	.	.	.	150	.					.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
			504	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.		.	.	.	.	.	.	.	.	530	.	.	.	.	.	.
Predicted Secondary structure		.																			.
Query SS confidence		.																			.
Query Sequence		.	E	L	A	G	D	E	R	A	T	L	L	L	L	G	M	G	L	D	.	E	F	S	M	S	A	I	S	I	P	R	I	K	K	I
Query Conservation		.																			.
Alig confidence		.																			.
Template Conservation
Template Sequence		L	D	V	E	G	L	Q	E	E	A	R	D	A	A	A	V	G	F	D	V	T	V	C	I	H	P	S	Q	I	P	V	V	R	K	A
Template Known Secondary structure		T																T		S					S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions