Return to main results Retrieve Phyre Job Id

Job DescriptionP08839
Confidence97.74%DateThu Jan 5 11:01:38 GMT 2012
Rank44Aligned Residues155
% Identity15%Templatec1aqfB_
PDB info PDB header:transferaseChain: B: PDB Molecule:pyruvate kinase; PDBTitle: pyruvate kinase from rabbit muscle with mg, k, and l-2 phospholactate
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   324.....330.........340.........350.........360.........370.........380.........390.........400...
Predicted Secondary structure 









































Query SS confidence 















































































Query Sequence  CGSQAVIVRTMDIGGDKELPYMNFPKEENPFLGWRAIRIAMDRREILRDQLRAILRASAFGKLRIMFPMIISVEEVRALR
Query Conservation      

 






 

         
 

 

 



  
    

  







   
 
 

 


    
     
Alig confidence 















































































Template Conservation 



 
 
 
       
   
   
 
 
 



 
     

 




  

  
    

 






   

   
Template Sequence  VDDGLISLQVKQKGPDFLVTEVENGGFLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDMVFASFIRKAADVHEVR
Template Known Secondary structure  TTTT

SSS

B

SS
B
TT





SS
TT
S
S
Template Predicted Secondary structure 































Template SS confidence 















































































   175....180.........190.........200.........210.........220.........230.........240.........250....
 
   404.....410.........420.........430.........440.........450.........460.........470.........480...
Predicted Secondary structure 






















Query SS confidence 















































































Query Sequence  KEIEIYKQELRDEGKAFDESIEIGVMVETPAAATIARHLAKEVDFFSIGTNDLTQYTLAVDRGNDMISHLYQPMSPSVLN
Query Conservation           
   
         
 






           

 






 

 

 

 
  
   
    



 
Alig confidence 




...........




































.....












.........
Template Conservation    
  ........... 
    





   

 





  










.....


   
 

  
.........
Template Sequence  KILGE. . . . . . . . . . . KGKNIKIISKIENHEGVRRFDEILEASDGIMVARGDL. . . . . GIEIPAEKVFLAQ. . . . . . . . .
Template Known Secondary structure  TT...........T
SSS
ST
S.....S
GGG.........
Template Predicted Secondary structure  ...........













.....




.........
Template SS confidence 















































































   255.... 260.........270.........280.........290...... ...300.........
 
   484.....490.........500.....
Predicted Secondary structure 





Query SS confidence 





















Query Sequence  LIKQVIDASHAEGKWTGMCGEL
Query Conservation   
   
  
   
  
 



 
Alig confidence  ..



















Template Conservation  ..
 

  
   









Template Sequence  . . KMIIGRCNRAGKPVICATQM
Template Known Secondary structure  ..T

SST
Template Predicted Secondary structure  ..





Template SS confidence 





















   310.........320.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions