Return to main results Retrieve Phyre Job Id

Job DescriptionP0AAT9
Confidence91.75%DateThu Jan 5 11:13:48 GMT 2012
Rank8Aligned Residues33
% Identity24%Templatec3a44D_
PDB info PDB header:metal binding proteinChain: D: PDB Molecule:hydrogenase nickel incorporation protein hypa; PDBTitle: crystal structure of hypa in the dimeric form
Resolution3.31 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   122.......130.........140.. .......150....
Predicted Secondary structure 









...........








Query SS confidence 




















. . . . . . . . . . .











Query Sequence  LGNLVCEKCHFHLPIYTPEVL. . . . . . . . . . . TLCPKCGHDQFQ
Query Conservation   
 
 
  

    
     
...........



 
    
 
Alig confidence 




















...........











Template Conservation 
    
  

                        

 


    
Template Sequence  EAVFKCRNCNYEWKLKEVKDKFDERIEVVHAFLACPKCGSHDFE
Template Known Secondary structure 


TTT

TT

TTGGG
S
SSSS




Template Predicted Secondary structure 






























Template SS confidence 











































   68.70.........80.........90.........100.........110.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions