Return to main results Retrieve Phyre Job Id

Job DescriptionP0AAT9
Confidence44.15%DateThu Jan 5 11:13:48 GMT 2012
Rank73Aligned Residues72
% Identity19%Templatec1k82D_
PDB info PDB header:hydrolase/dnaChain: D: PDB Molecule:formamidopyrimidine-dna glycosylase; PDBTitle: crystal structure of e.coli formamidopyrimidine-dna2 glycosylase (fpg) covalently trapped with dna
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   40.........50.........60.........70.........80.........90.........100.........110.........
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Query Sequence  TGELTRTEVDELTRAVRRDLEEFAMSYEESLKEESDSVFMRVIKESLWQELADITDKTQLEWREVFQDLNHHGVYHSGEV
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Template Sequence  ASSLSLAECELLARVIKAVLLRSIEQGGTTLKP. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GYFAQELQ
Template Known Secondary structure  GGG

TT
B



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BGGGG
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   186...190.........200.........210........ .220......
 
   120 .........130........ .140.........150
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Query Sequence  V. GLGNLVCEKCHFHLPIYT. . PEVLTLCPKCGH
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Template Sequence  VYGRKGEPCRVCGTPIVATKHAQRATFYCRQCQK
Template Known Secondary structure  STT
TTSB
TTT

B
TT
TTT

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   235....240.........250.........260........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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