Job Description P76575 Confidence 34.48% Date Thu Jan 5 12:24:44 GMT 2012 Rank 60 Aligned Residues 35 % Identity 46% Template c3pihA_ PDB info PDB header:hydrolase/dna Chain: A: PDB Molecule:uvrabc system protein a; PDBTitle: t. maritima uvra in complex with fluorescein-modified dna Resolution 2.90 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	C	P	Q	C	Q	H	V	L	D	Q	D	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	C	P	E	C	G	R	P	L	E	K	K	S	I	D	E	I	L	Q	D	L	F	N	S	F	K	E	G	S	R	I	Y	I	L	A	P	L	V	V	D	R	L	I	L	E	T	R	N	E	H	R	I	L	D	S	L	E	L	A	M	R	E	G	K	G	F	V	E	I	R	N	V	D	T	G	E	S	K	I	F
Template Known Secondary structure		B		T	T	T			B		B															S		T	T																		G	G	G																T	S							T	T	T
Template Predicted Secondary structure
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
			17	.	.	20	.	.	.	.	.	.	.	.	.												30	.	.	.	.	.	.	.	.
Predicted Secondary structure		.														.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.														.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	G	H	A	R	C	R	S	C	G	E	F	I	E	.	.	.	.	.	.	.	.	.	.	.	M	K	A	L	C	P	D	C	H
Query Conservation		.														.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.														.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	E	N	L	M	C	P	V	C	G	I	G	F	P	E	I	T	P	K	L	F	S	F	N	S	P	Y	G	A	C	P	N	C	H
Template Known Secondary structure			S	S		B		T	T	T								S	G	G	G	G		T	T	S	T	T	T	B		T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions