Return to main results Retrieve Phyre Job Id

Job DescriptionP76575
Confidence37.72%DateThu Jan 5 12:24:44 GMT 2012
Rank51Aligned Residues40
% Identity33%Templatec3l11A_
PDB info PDB header:ligaseChain: A: PDB Molecule:e3 ubiquitin-protein ligase rnf168; PDBTitle: crystal structure of the ring domain of rnf168
Resolution2.12 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.... .....20.........30... ......40.
Predicted Secondary structure 








....




..


Query SS confidence 












. . . .


















. .







Query Sequence  ELHCPQCQHVLDQ. . . . DNGHARCRSCGEFIEMKAL. . CPDCHQPL
Query Conservation     

 

  
  ....      
  
   
   
 ..

 
   
Alig confidence 












....


















..







Template Conservation 
  



      

   


 

  

          

 

  
Template Sequence  ECQCGICMEILVEPVTLPCNHTLCKPCFQSTVEKASLCCPFCRRRV
Template Known Secondary structure  B
TTT
SB
SS

TTS

TTTTTSB
TTT

B
Template Predicted Secondary structure 



















Template SS confidence 













































   13......20.........30.........40.........50........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions