Job Description P76575 Confidence 27.82% Date Thu Jan 5 12:24:44 GMT 2012 Rank 77 Aligned Residues 40 % Identity 30% Template c1rmdA_ PDB info PDB header:dna-binding protein Chain: A: PDB Molecule:rag1; PDBTitle: rag1 dimerization domain Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.					.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.			.	.	.	.	.	.	.	40	.
Predicted Secondary structure															.	.	.	.																			.	.
Query SS confidence															.	.	.	.																			.	.
Query Sequence		E	L	H	C	P	Q	C	Q	H	V	L	D	Q	.	.	.	.	D	N	G	H	A	R	C	R	S	C	G	E	F	I	E	M	K	A	.	.	L	C	P	D	C	H	Q	P	L
Query Conservation															.	.	.	.																			.	.
Alig confidence															.	.	.	.																			.	.
Template Conservation
Template Sequence		S	I	S	C	Q	I	C	E	H	I	L	A	D	P	V	E	T	S	C	K	H	L	F	C	R	I	C	I	L	R	C	L	K	V	M	G	S	Y	C	P	S	C	R	Y	P	C
Template Known Secondary structure			T	B		T	T	T		S	B		S	S					T	T	S															T		S	B		T	T	T			B
Template Predicted Secondary structure
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions