Job Description P77434 Confidence 100.00% Date Thu Jan 5 12:29:17 GMT 2012 Rank 49 Aligned Residues 367 % Identity 16% Template d2csta_ SCOP info PLP-dependent transferase-like PLP-dependent transferases AAT-like Resolution 1.90

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.						.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																																					.	.	.	.	.																									.
Query SS confidence																																					.	.	.	.	.																									.
Query Sequence		F	T	R	I	D	R	L	P	P	Y	V	F	N	I	T	A	E	L	K	M	A	A	R	R	R	G	E	D	I	I	D	F	S	M	G	.	.	.	.	.	N	P	D	G	A	T	P	P	H	I	V	E	K	L	C	T	V	A	Q	R	P	D	T	H	.	G	Y	S	T	S	R	G	I	P	R	L	R	R	A	I
Query Conservation																																					.	.	.	.	.																									.
Alig confidence																											.	.									.	.	.	.	.																									.
Template Conservation																											.	.
Template Sequence		F	A	A	V	P	R	A	P	P	V	A	V	F	K	L	T	A	D	F	R	E	D	G	D	S	.	.	R	K	V	N	L	G	V	G	A	Y	R	T	D	E	G	Q	P	W	V	L	P	V	V	R	K	V	E	Q	L	I	A	G	D	G	S	L	N	H	E	Y	L	P	I	L	G	L	P	E	F	R	A	N	A
Template Known Secondary structure		T	T	T																						T	.	.	T						S	S					T	T	S																			T	T								T	T
Template Predicted Secondary structure																											.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30			.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.								.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																			.																			.	.	.	.	.	.	.
Query SS confidence																			.																			.	.	.	.	.	.	.
Query Sequence		S	R	W	Y	Q	D	R	Y	D	V	E	I	D	P	E	S	E	.	A	I	V	T	I	G	S	K	E	G	L	A	H	L	M	L	A	T	.	.	.	.	.	.	.	L	D	H	G	D	T	V	L	V	P	N	P	S	Y	P	I	H	I	Y	G	A	V	I	A	G	A	Q	V	R	S	V	P	L	V	E	G	V
Query Conservation																			.																			.	.	.	.	.	.	.
Alig confidence																			.																			.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	R	I	A	L	G	D	D	S	P	A	I	A	Q	K	R	V	G	S	V	Q	G	L	G	G	T	G	A	L	R	I	G	A	E	F	L	R	R	W	Y	N	G	N	N	N	T	A	T	P	V	Y	V	S	S	P	T	W	E	N	H	N	S	V	F	M	D	A	G	F	K	D	I	R	T	Y	R	Y	W	D	A
Template Known Secondary structure								T	T						T	T																									S	S	S	S	S		T	T	S						S	S			T									T	T												T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		156					.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220			.	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.																																																																	.	.
Query SS confidence			.	.	.	.																																																																	.	.
Query Sequence		D	.	.	.	.	F	F	N	E	L	E	R	A	I	R	E	S	Y	P	K	P	K	M	M	I	L	G	F	P	S	N	P	T	A	Q	C	V	E	L	E	F	F	E	K	V	V	A	L	A	K	R	Y	D	V	L	V	V	H	D	L	A	Y	A	D	I	V	Y	D	G	.	.	W	K	A	P	S	I	M	Q	V
Query Conservation			.	.	.	.																																																																	.	.
Alig confidence			.	.	.	.																																																																	.	.
Template Conservation
Template Sequence		A	K	R	G	L	D	L	Q	G	L	L	D	D	M	E	K	A	P	E	F	S	I	F	I	L	H	A	C	A	H	N	P	T	G	T	D	P	T	P	D	E	W	K	Q	I	A	A	V	M	K	R	R	C	L	F	P	F	F	D	S	A	Y	Q	G	F	A	S	G	S	L	D	K	D	A	W	A	V	R	Y	F
Template Known Secondary structure		T	T	T													T	S		T	T							S	S	S		T	T	T																				T								S		T	T	T	T	T	S						T
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.								260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290							.	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.																																.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.																																.	.	.	.	.	.
Query Sequence		P	G	A	R	D	V	A	V	E	F	F	T	L	S	K	S	Y	N	M	A	G	W	R	I	G	F	M	V	G	N	.	.	.	.	.	.	.	K	T	L	V	S	A	L	A	R	I	K	S	Y	H	D	Y	G	T	F	T	P	L	Q	V	A	A	I	A	A	L	E	.	.	.	.	.	.	G	D	Q	Q	C	V
Query Conservation																																.	.	.	.	.	.	.																																.	.	.	.	.	.
Alig confidence																																.	.	.	.	.	.	.																																.	.	.	.	.	.
Template Conservation
Template Sequence		V	S	E	G	F	E	L	F	C	A	Q	S	F	S	K	N	F	G	L	Y	N	E	R	V	G	N	L	S	V	V	G	K	D	E	D	N	V	Q	R	V	L	S	Q	M	E	K	I	V	R	T	T	W	S	N	P	P	S	Q	G	A	R	I	V	A	T	T	L	T	S	P	Q	L	F	A	E	W	K	D	N	V
Template Known Secondary structure				T	T										T	T	T	S			G	G	G										S	S																	T	T	T	S	S			S
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.					.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
Predicted Secondary structure																								.	.	.	.
Query SS confidence																								.	.	.	.
Query Sequence		R	D	I	A	E	Q	Y	K	R	R	R	D	V	L	V	K	G	L	H	E	A	G	.	.	.	.	W	M	V	E	M	P	K	A	S	M	Y	V	W	A	K	I	P	E	P	Y	A	A	M	G	S	L	E	F	A	K	K	L	L	N	E	A	K	V	C	V	S	P	G	I	G	F	G	D	Y	G	D	T	H	V
Query Conservation																								.	.	.	.
Alig confidence																								.	.	.	.																	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Template Sequence		K	T	M	A	D	R	V	L	L	M	R	S	E	L	R	S	R	L	E	S	L	G	T	P	G	T	W	N	H	I	T	D	Q	I	G	M	F	S	F	T	G	L	.	.	.	.	.	.	.	.	N	P	K	Q	V	E	Y	M	I	K	E	K	H	I	Y	L	M	A	S	G	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																							T		S	S			T							S	S							.	.	.	.	.	.	.	.											T	T						T	T		.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.									.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
		373	.	.	.	.		.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		R	F	A	L	I	.	E	N	R	D	R	I	R	Q	A	I	R	G	I	K	A	M	F	R	A
Query Conservation							.
Alig confidence							.
Template Conservation
Template Sequence		R	I	N	M	C	G	L	T	T	K	N	L	D	Y	V	A	K	S	I	H	E	A	V	T	K
Template Known Secondary structure					G	G	G			T	T	T
Template Predicted Secondary structure
Template SS confidence
		386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions