Job Description P77434 Confidence 99.97% Date Thu Jan 5 12:29:17 GMT 2012 Rank 125 Aligned Residues 340 % Identity 14% Template d2byla1 SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.15

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		34	.	.	.	.	.	40	.	.	.	.			.	.	.	.	.		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure													.	.						.
Query SS confidence													.	.						.
Query Sequence		R	G	E	D	I	I	D	F	S	M	G	.	.	N	P	D	G	A	.	T	P	P	H	I	V	E	K	L	C	T	V	A	Q	R	P	D	T	H	G	Y	S	T	S	R	G	I	P	R	L	R	R	A	I	S	R	W	Y	Q	D	R	Y	D	V	E	I	D	P	E	S	E	A	I	V	T	I	G	S	K	E	G
Query Conservation													.	.						.
Alig confidence													.	.						.																		.	.	.																									.	.	.	.	.
Template Conservation																																						.	.	.																									.	.	.	.	.
Template Sequence		E	G	R	K	Y	F	D	F	L	S	S	I	S	A	V	N	Q	G	H	C	H	P	K	I	V	N	A	L	K	S	Q	V	D	K	L	T	.	.	.	L	T	S	R	A	F	Y	N	N	V	L	G	E	Y	E	E	Y	I	T	K	L	F	N	Y	.	.	.	.	.	H	K	V	L	P	M	N	T	G	V	E	A
Template Known Secondary structure		T							S	S					T		T	T		B	T													T	T			.	.	.				T	T	S			S	S													T		.	.	.	.	.	S						S	S
Template Predicted Secondary structure																																						.	.	.																									.	.	.	.	.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.				110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.						.	.	.	.	.	.	140	.	.	.	.	.
		111	.	.	.	.	.	.	.	.											120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.							.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.
Query Sequence		L	A	H	L	M	L	A	T	L	.	.	.	.	.	.	.	.	.	.	D	H	G	D	T	V	L	V	P	N	P	S	Y	P	I	H	I	Y	G	A	V	I	A	G	A	Q	V	R	S	.	.	.	.	.	.	V	P	L	V	E	G	V	D	F	F	N	E	L	E	R	A	I	R	E	S	Y	P	K	P	K	M
Query Conservation											.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.
Template Conservation
Template Sequence		G	E	T	A	C	K	L	A	R	K	W	G	Y	T	V	K	G	I	Q	K	Y	K	A	K	I	V	F	A	A	G	N	F	W	G	R	T	L	S	A	I	S	S	S	T	D	P	T	S	Y	D	G	F	G	P	F	M	P	G	F	D	I	I	P	Y	N	D	L	P	A	L	E	R	A	L	Q	D	P	N	V	A
Template Known Secondary structure																T	T				T	T								T	T						S					T	T								T	T	S		S			T	T						T	T										T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		175	.	.	.	.	180			.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure								.	.
Query SS confidence								.	.
Query Sequence		M	I	L	G	F	P	.	.	S	N	P	T	A	Q	C	V	E	L	E	F	F	E	K	V	V	A	L	A	K	R	Y	D	V	L	V	V	H	D	L	A	Y	A	D	I	V	Y	D	G	W	K	A	P	S	I	M	Q	V	P	G	A	R	D	V	A	V	E	F	F	T	L	S	K	S	Y	N	M	A	G	W	R
Query Conservation								.	.
Alig confidence								.	.																																												.	.	.	.	.
Template Conservation																																																					.	.	.	.	.
Template Sequence		A	F	M	V	E	P	I	Q	G	E	A	G	V	V	V	P	D	P	G	Y	L	M	G	V	R	E	L	C	T	R	H	Q	V	L	F	I	A	D	E	I	Q	T	G	L	A	R	T	G	R	W	L	.	.	.	.	.	A	V	D	Y	E	N	V	R	P	D	I	V	L	L	G	K	A	L	S	G	G	L	Y	P
Template Known Secondary structure							S	S	B	T	T	T	T	S	B				T	T													T								T	T	T	T	T	T	T	T	S	S	S	S	.	.	.	.	.	G	G	G	G	G	T				S						G	G	G	G	T	T	S	S
Template Predicted Secondary structure																																																					.	.	.	.	.
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.						.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.			.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure																																																																				.	.
Query SS confidence																																																																				.	.
Query Sequence		I	G	F	M	V	G	N	K	T	L	V	S	A	L	A	R	I	K	S	Y	H	D	Y	G	T	F	T	P	L	Q	V	A	A	I	A	A	L	E	G	D	Q	Q	C	V	R	D	I	A	E	Q	Y	K	R	R	R	D	V	L	V	K	G	L	H	E	A	G	.	.	W	M	V	E	M	P	K	A	S	M	Y	V
Query Conservation																																																																				.	.
Alig confidence																																												.	.																							.	.
Template Conservation																																												.	.
Template Sequence		V	S	A	V	L	C	D	D	D	I	M	L	T	I	K	P	G	E	H	F	S	T	Y	G	G	N	P	L	G	C	R	V	A	I	A	A	L	E	V	L	E	E	.	.	E	N	L	A	E	N	A	D	K	L	G	I	I	L	R	N	E	L	M	K	L	P	S	D	V	V	T	A	V	R	G	K	G	L	L	N
Template Known Secondary structure													T	T	S		T	T	S	S			S	S	T	T																		.	.	T	T																		T	S		T	T	T								T	T
Template Predicted Secondary structure																																												.	.
Template SS confidence
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.			.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.			.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure																																														.	.
Query SS confidence																																														.	.
Query Sequence		W	A	K	I	P	E	P	Y	A	A	M	G	S	L	E	F	A	K	K	L	L	N	E	A	K	V	C	V	S	P	G	I	G	F	G	D	Y	G	D	T	H	V	R	F	.	.	A	L	I	E	N	R	D	R	I	R	Q	A	I	R	G	I	K	A	M	F	R	A
Query Conservation																																														.	.
Alig confidence									.																.								.	.	.	.	.	.								.	.
Template Conservation									.																.								.	.	.	.	.	.
Template Sequence		A	I	V	I	K	E	T	.	K	D	W	D	A	W	K	V	C	L	R	L	R	D	N	.	G	L	L	A	K	P	T	.	.	.	.	.	.	H	G	D	I	I	R	F	A	P	P	L	V	I	K	E	D	E	L	R	E	S	I	E	I	I	N	K	T	I	L	S
Template Known Secondary structure									.	S	S													T	.	T							.	.	.	.	.	.		T	T								T	T																			T
Template Predicted Secondary structure									.																.								.	.	.	.	.	.
Template SS confidence
		379	380	.	.	.	.	.		.	.	.	.	390	.	.	.	.	.	.	.	.	.	400		.	.	.	.	.	.	.							.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions