Job Description P77434 Confidence 100.00% Date Thu Jan 5 12:29:17 GMT 2012 Rank 54 Aligned Residues 367 % Identity 17% Template d1yaaa_ SCOP info PLP-dependent transferase-like PLP-dependent transferases AAT-like Resolution 2.05

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.						.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																																					.	.	.	.	.																							.
Query SS confidence																																					.	.	.	.	.																							.
Query Sequence		F	T	R	I	D	R	L	P	P	Y	V	F	N	I	T	A	E	L	K	M	A	A	R	R	R	G	E	D	I	I	D	F	S	M	G	.	.	.	.	.	N	P	D	G	A	T	P	P	H	I	V	E	K	L	C	T	V	A	Q	R	P	D	.	T	H	G	Y	S	T	S	R	G	I	P	R	L	R	R	A	I
Query Conservation																																					.	.	.	.	.																							.
Alig confidence																													.	.							.	.	.	.	.																							.
Template Conservation																													.	.
Template Sequence		F	N	N	I	E	L	L	P	P	D	A	L	F	G	I	K	Q	R	Y	G	Q	D	Q	R	A	T	K	.	.	V	D	L	G	I	G	A	Y	R	D	D	N	G	K	P	W	V	L	P	S	V	K	A	A	E	K	L	I	H	N	D	S	S	Y	N	H	E	Y	L	G	I	T	G	L	P	S	L	T	S	N	A
Template Known Secondary structure		T	T	T								T	T									T				S	S		.	.				S	S				B		T	T	S		B															T		T	T								T	T
Template Predicted Secondary structure																													.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.			.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.			.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																						.																.	.
Query SS confidence																						.																.	.
Query Sequence		S	R	W	Y	Q	D	R	Y	D	V	E	I	D	P	E	S	E	A	I	V	.	T	I	G	S	K	E	G	L	A	H	L	M	L	A	T	.	.	L	D	H	G	D	T	V	L	V	P	N	P	S	Y	P	I	H	I	Y	G	A	V	I	A	G	A	Q	V	R	S	V	P	L	V	E	G	V	D	F	F	N	E
Query Conservation																						.																.	.
Alig confidence																						.																.	.
Template Conservation
Template Sequence		A	K	I	I	F	G	T	Q	S	D	A	L	Q	E	D	R	V	I	S	V	Q	S	L	S	G	T	G	A	L	H	I	S	A	K	F	F	S	K	F	F	P	D	K	L	V	Y	L	S	K	P	T	W	A	N	H	M	A	I	F	E	N	Q	G	L	K	T	A	T	Y	P	Y	W	A	N	E	T	K	S	L	D
Template Known Secondary structure								T	T						T	T																										T	T								S			T	T							T	T	T											T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		161	.	.	.	.	.	.	.				.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.						.	.	.	.	.	.	230	.	.
Predicted Secondary structure										.	.	.																																																								.	.	.	.	.
Query SS confidence										.	.	.																																																								.	.	.	.	.
Query Sequence		L	E	R	A	I	R	E	S	.	.	.	Y	P	K	P	K	M	M	I	L	G	F	P	S	N	P	T	A	Q	C	V	E	L	E	F	F	E	K	V	V	A	L	A	K	R	Y	D	V	L	V	V	H	D	L	A	Y	A	D	I	V	Y	D	G	W	K	A	.	.	.	.	.	P	S	I	M	Q	V	P	G	A
Query Conservation										.	.	.																																																								.	.	.	.	.
Alig confidence										.	.	.																																																								.	.	.	.	.
Template Conservation
Template Sequence		L	N	G	F	L	N	A	I	Q	K	A	P	E	G	S	I	F	V	L	H	S	C	A	H	N	P	T	G	L	D	P	T	S	E	Q	W	V	Q	I	V	D	A	I	A	S	K	N	H	I	A	L	F	D	T	A	Y	Q	G	F	A	T	G	D	L	D	K	D	A	Y	A	V	R	L	G	V	E	K	L	S	T
Template Known Secondary structure												S		T	T								S	S		T	T	T																			T	T								S		T	T	T	S	S	S						T										T	T	T
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.												260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.							.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.
Query Sequence		R	D	V	A	V	E	F	F	T	L	S	K	S	Y	N	M	A	G	W	R	I	G	F	M	V	G	N	.	.	.	.	.	.	.	.	.	.	.	K	T	L	V	S	A	L	A	R	I	K	S	Y	H	D	Y	G	T	F	T	P	L	Q	V	A	A	I	A	A	L	E	G	D	.	.	.	.	.	.	Q	Q	C
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.
Template Conservation
Template Sequence		V	S	P	V	F	V	C	Q	S	F	A	K	N	A	G	M	Y	G	E	R	V	G	C	F	H	L	A	L	T	K	Q	A	Q	N	K	T	I	K	P	A	V	T	S	Q	L	A	K	I	I	R	S	E	V	S	N	P	P	A	Y	G	A	K	I	V	A	K	L	L	E	T	P	E	L	T	E	Q	W	H	K	D
Template Known Secondary structure		T										T	T	T	S			G	G	G											S		T	T																		T	T	T	S	S															S
Template Predicted Secondary structure
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.					.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure																									.	.	.	.
Query SS confidence																									.	.	.	.
Query Sequence		V	R	D	I	A	E	Q	Y	K	R	R	R	D	V	L	V	K	G	L	H	E	A	G	.	.	.	.	W	M	V	E	M	P	K	A	S	M	Y	V	W	A	K	I	P	E	P	Y	A	A	M	G	S	L	E	F	A	K	K	L	L	N	E	A	K	V	C	V	S	P	G	I	G	F	G	D	Y	G	D	T	H
Query Conservation																									.	.	.	.
Alig confidence																									.	.	.	.																	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.
Template Sequence		M	V	T	M	S	S	R	I	T	K	M	R	H	A	L	R	D	H	L	V	K	L	G	T	P	G	N	W	D	H	I	V	N	Q	C	G	M	F	S	F	T	G	L	.	.	.	.	.	.	.	.	T	P	Q	M	V	K	R	L	E	E	T	H	A	V	Y	L	V	A	S	G	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																								T		S	S			T							S	S							.	.	.	.	.	.	.	.																		T	T	S	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.
Template SS confidence
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.									.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
		372	.	.	.	.	.		.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		V	R	F	A	L	I	.	E	N	R	D	R	I	R	Q	A	I	R	G	I	K	A	M	F	R	A
Query Conservation								.
Alig confidence		.						.
Template Conservation		.
Template Sequence		.	R	A	S	I	A	G	L	N	Q	G	N	V	E	Y	V	A	K	A	I	D	E	V	V	R	F
Template Known Secondary structure		.				G	G	G			T	T	T
Template Predicted Secondary structure		.
Template SS confidence
			386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions