Job Description P77434 Confidence 100.00% Date Thu Jan 5 12:29:17 GMT 2012 Rank 82 Aligned Residues 387 % Identity 14% Template d1tpla_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Beta-eliminating lyases Resolution 2.30

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.						50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.
Query SS confidence																																								.	.	.	.	.
Query Sequence		R	I	D	R	L	P	P	Y	V	F	N	I	T	A	E	L	K	M	A	A	R	R	R	G	E	D	I	I	D	F	S	M	G	N	P	D	G	A	.	.	.	.	.	T	P	P	H	I	V	E	K	L	C	T	V	A	Q	R	P	D	T	H	G	Y	S	T	S	R	G	I	P	R	L	R	R	A	I	S	R	W
Query Conservation																																								.	.	.	.	.
Alig confidence																																								.	.	.	.	.																				.
Template Conservation																																																																.
Template Sequence		R	I	K	S	V	E	T	V	S	M	I	P	R	D	E	R	L	K	K	M	Q	E	A	G	Y	N	T	F	L	L	N	S	K	D	I	Y	I	D	L	L	T	D	S	G	T	N	A	M	S	D	K	Q	W	A	G	M	M	M	G	D	E	A	.	Y	A	G	S	E	N	F	Y	H	L	E	R	T	V	Q	E	L
Template Known Secondary structure																								T	T	T		G	G	G	S		G	G	G		S				S		S	S	S													T	T					.	S	S	S
Template Predicted Secondary structure																																																																.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160			.	.	.	.
Predicted Secondary structure																																																																												.	.
Query SS confidence																																																																												.	.
Query Sequence		Y	Q	D	R	Y	D	V	E	I	D	P	E	S	E	A	I	V	T	I	G	S	K	E	G	L	A	H	L	M	L	A	T	L	D	H	G	D	T	V	L	V	P	N	P	S	Y	P	I	H	I	Y	G	A	V	I	A	G	A	Q	V	R	S	V	P	L	V	E	G	V	D	F	F	N	E	.	.	L	E	R	A
Query Conservation																																																																												.	.
Alig confidence				.	.	.	.	.	.	.	.	.																																																																.	.
Template Conservation				.	.	.	.	.	.	.	.	.
Template Sequence		F	G	.	.	.	.	.	.	.	.	.	F	K	H	I	V	P	T	H	Q	G	R	G	A	E	N	L	L	S	Q	L	A	I	K	P	G	Q	Y	V	A	G	N	M	Y	K	N	G	A	V	F	V	D	I	V	R	D	E	A	H	D	A	G	L	N	I	A	F	K	G	D	I	D	L	K	K	L	Q	K	L	I
Template Known Secondary structure				.	.	.	.	.	.	.	.	.		S						S	S															T	T						S					S	S						B		T	T	S	S		S	S				T	T	T	T		B
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.
Template SS confidence
		88	.										90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.		.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.								.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																						.																																			.	.	.	.	.	.	.
Query SS confidence																						.																																			.	.	.	.	.	.	.
Query Sequence		I	R	E	S	Y	P	K	P	K	M	M	I	L	G	F	P	S	N	P	T	.	A	Q	C	V	E	L	E	F	F	E	K	V	V	A	L	A	K	R	Y	D	V	L	V	V	H	D	L	A	Y	A	D	I	V	Y	.	.	.	.	.	.	.	D	G	W	K	A	P	S	I	M	Q	V	P	G	A	R	D	V	A
Query Conservation																						.																																			.	.	.	.	.	.	.
Alig confidence																						.																																			.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	E	K	G	A	E	N	I	A	Y	I	C	L	A	V	T	V	N	L	A	G	G	Q	P	V	S	M	A	N	M	R	A	V	R	E	L	T	A	A	H	G	I	K	V	F	Y	D	A	T	R	C	V	E	N	A	Y	F	I	K	E	Q	E	Q	G	F	E	N	K	S	I	A	E	I	V	H	E	M	F	S	Y
Template Known Secondary structure						G	G	G								S	S	B		S	T	T		B																	T	T								T	T												S	T	T		T	T	S												T
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.					.	.	310	.	.
Predicted Secondary structure																																																																									.	.	.	.
Query SS confidence																																																																									.	.	.	.
Query Sequence		V	E	F	F	T	L	S	K	S	Y	N	M	A	G	W	R	I	G	F	M	V	G	N	K	T	L	V	S	A	L	A	R	I	K	S	Y	H	D	Y	G	T	F	T	P	L	Q	V	A	A	I	A	A	L	E	G	D	Q	Q	C	V	R	D	I	A	E	Q	Y	K	R	R	R	.	.	.	.	D	V	L	V	K
Query Conservation																																																																									.	.	.	.
Alig confidence																																																																									.	.	.	.
Template Conservation
Template Sequence		A	D	G	C	T	M	S	G	K	K	D	C	L	V	N	I	G	G	F	L	C	M	N	D	D	E	M	F	S	S	A	K	E	L	V	V	V	Y	E	G	M	P	S	Y	G	G	L	A	G	R	D	M	E	A	M	A	I	G	L	R	E	A	M	Q	Y	E	Y	I	E	H	R	V	K	Q	V	R	Y	L	G	D
Template Known Secondary structure		S	S						T	T	T	T	T			S	S																								S	S			S	S	S																T	T
Template Predicted Secondary structure
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.						.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.				.	380	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.																																												.	.	.
Query SS confidence																									.	.	.	.	.																																												.	.	.
Query Sequence		G	L	H	E	A	G	W	M	V	E	M	P	K	A	S	M	Y	V	W	A	K	I	P	.	.	.	.	.	E	P	Y	A	A	M	G	S	L	E	F	A	K	K	L	L	N	E	A	K	V	C	V	S	P	G	I	G	F	G	D	Y	G	D	T	H	V	R	F	A	L	I	E	.	.	.	N	R	D	R	I	R
Query Conservation																									.	.	.	.	.																																												.	.	.
Alig confidence																									.	.	.	.	.																										.	.	.	.															.	.	.
Template Conservation																																																							.	.	.	.
Template Sequence		K	L	K	A	A	G	V	P	I	V	E	P	V	G	G	H	A	V	F	L	D	A	R	R	F	C	E	H	L	T	Q	D	E	F	P	A	Q	S	L	A	A	S	I	Y	V	E	T	G	V	R	S	M	E	.	.	.	.	R	G	I	K	L	E	T	V	R	L	T	I	P	R	R	V	Y	T	Y	A	H	M	D
Template Known Secondary structure					T	T	T			B		S	S			S	S										T	T	T	S		G	G	G															S						.	.	.	.														T	T	S
Template Predicted Secondary structure																																																							.	.	.	.
Template SS confidence
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380					.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
		385	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	I	R	G	I	K	A	M	F	R	A	D	G	L	L	P	A	S	S	K	H	I	H	E	N	A	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	V	A	D	G	I	I	K	L	Y	Q	H	K	E	D	I	R	G	L	K	F	I	Y	F	F	T	A	R
Template Known Secondary structure												T	T	G	G	G											S
Template Predicted Secondary structure
Template SS confidence
		419	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions