Job Description P77434 Confidence 99.96% Date Thu Jan 5 12:29:17 GMT 2012 Rank 136 Aligned Residues 327 % Identity 16% Template d1qz9a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 1.85

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.				.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure																																							.	.	.
Query SS confidence																																							.	.	.
Query Sequence		E	D	I	I	D	F	S	M	G	N	P	D	G	A	T	P	P	H	I	V	E	K	L	C	T	V	A	Q	R	P	D	T	H	G	Y	S	T	.	.	.	S	R	G	I	P	R	L	R	R	A	I	S	R	W	Y	Q	D	R	Y	D	V	E	I	D	P	E	S	E	A	I	V	T	I	G	S	K	E	G	L	A
Query Conservation																																							.	.	.
Alig confidence											.																												.	.	.																								.	.	.
Template Conservation											.																																																						.	.	.
Template Sequence		E	G	V	I	Y	L	D	G	N	.	S	L	G	A	R	P	V	A	A	L	A	R	A	Q	A	V	I	A	E	E	W	G	N	G	L	I	R	S	W	N	S	A	G	W	R	D	L	S	E	R	L	G	N	R	L	A	T	L	I	G	A	R	D	.	.	.	G	E	V	V	V	T	D	T	T	S	I	N	L	F
Template Known Secondary structure		T	T						T	T	.	T	S				B	T	T											T						G	G	G					T	S	G	G	G											T	T	T	T			T	.	.	.	T	S					S
Template Predicted Secondary structure											.																																																						.	.	.
Template SS confidence
		27	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.				.	90	.	.	.	.	.	.	.	.	.	100	.	.
		113	.	.	.	.	.								.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.					.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure								.	.	.	.	.	.	.																								.	.	.	.
Query SS confidence								.	.	.	.	.	.	.																								.	.	.	.
Query Sequence		H	L	M	L	A	T	.	.	.	.	.	.	.	L	D	H	G	D	T	V	L	V	P	N	P	S	Y	P	I	H	I	Y	G	A	V	I	.	.	.	.	A	G	A	Q	V	R	S	V	P	L	V	E	G	V	D	F	F	N	E	L	E	R	A	I	R	E	S	Y	P	K	P	K	M	M	I	L	G	F	P	S
Query Conservation								.	.	.	.	.	.	.																								.	.	.	.
Alig confidence								.	.	.	.	.	.	.																								.	.	.	.												.	.	.	.	.	.	.
Template Conservation																																																					.	.	.	.	.	.	.
Template Sequence		K	V	L	S	A	A	L	R	V	Q	A	T	R	S	P	E	R	R	V	I	V	T	E	T	S	N	F	P	T	D	L	Y	I	A	E	G	L	A	D	M	L	Q	Q	G	Y	T	L	R	L	V	D	.	.	.	.	.	.	.	S	P	E	E	L	P	Q	A	I	D	Q	D	T	A	V	V	M	L	T	H	V	N
Template Known Secondary structure															S	T	T								T	T	S																	S	S							S	.	.	.	.	.	.	.	S	G	G	G						S	T	T								S	B
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.								.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	P	T	A	Q	C	V	E	L	E	F	F	E	K	V	V	A	L	A	K	R	Y	D	V	L	V	V	H	D	L	A	Y	A	D	I	V	Y	D	G	W	K	A	P	S	I	M	Q	V	P	G	A	R	D	V	A	V	E	F	F	T	L	S	K	S	Y	N	M	A	G	W	R	I	G	F	M	V	G	N	K	T
Query Conservation
Alig confidence										.	.	.																														.	.	.	.	.	.	.	.
Template Conservation										.	.	.																														.	.	.	.	.	.	.	.
Template Sequence		Y	K	T	G	Y	M	H	D	.	.	.	M	Q	A	L	T	A	L	S	H	E	C	G	A	L	A	I	W	D	L	A	H	S	A	G	A	V	P	V	D	.	.	.	.	.	.	.	.	L	H	Q	A	G	A	D	Y	A	I	G	C	T	Y	K	Y	L	N	G	G	P	G	S	Q	A	F	V	W	V	S	P	Q
Template Known Secondary structure		T	T	T		B	B			.	.	.												T								T	T	T	T	T	T	S				.	.	.	.	.	.	.	.					T		S						S	S	S	T	T				T	T									T	T
Template Predicted Secondary structure										.	.	.																														.	.	.	.	.	.	.	.
Template SS confidence
		176	.	.	.	180	.	.	.				.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.									.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		262	.	.	.	.	.	.	.	270	.	.	.																								.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290		.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Query Sequence		L	V	S	A	L	A	R	I	K	S	Y	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	Y	G	T	F	T	P	L	Q	V	A	A	I	A	A	L	E	.	G	D	Q	Q	C	V	R	D	I	A	E	Q	Y	K	R	R	R	D	V	L	V	K	G	L	H	E	A
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation
Template Sequence		L	C	D	L	V	P	Q	P	L	S	G	W	F	G	H	S	R	Q	F	A	M	E	P	R	Y	E	P	S	N	G	I	A	R	Y	L	C	G	T	Q	P	I	T	S	L	A	M	V	E	C	G	L	D	V	F	A	Q	T	D	M	A	S	L	R	R	K	S	L	A	L	T	D	L	F	I	E	L	V	E	Q	R
Template Known Secondary structure		T	T	T	T	S			S				G	G	G	B		T	T	S				S	S			B		S	S	G	G	G	G			S																		T	T	S
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
						318	.	320	.	.	.	.	.	.					.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.				.	380	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.										.	.	.	.																																																					.	.	.
Query SS confidence		.	.	.	.										.	.	.	.																																																					.	.	.
Query Sequence		.	.	.	.	G	W	M	V	E	M	P	K	A	.	.	.	.	S	M	Y	V	W	A	K	I	P	E	P	Y	A	A	M	G	S	L	E	F	A	K	K	L	L	N	E	A	K	V	C	V	S	P	G	I	G	F	G	D	Y	G	D	T	H	V	R	F	A	L	I	E	.	.	.	N	R	D	R	I	R	Q	A
Query Conservation		.	.	.	.										.	.	.	.																																																					.	.	.
Alig confidence		.	.	.	.										.	.	.	.											.	.	.	.	.	.									.									.	.	.	.	.	.														.	.	.
Template Conservation																													.	.	.	.	.	.									.									.	.	.	.	.	.
Template Sequence		C	A	A	H	E	L	T	L	V	T	P	R	E	H	A	K	R	G	S	H	V	S	F	E	H	P	E	.	.	.	.	.	.	G	Y	A	V	I	Q	A	L	.	I	D	R	G	V	I	G	D	.	.	.	.	.	.	Y	R	E	P	R	I	M	R	F	G	F	T	P	L	Y	T	T	F	T	E	V	W	D	A
Template Known Secondary structure			T	T	S						S		S	S	G	G	G	B		S							T	T	.	.	.	.	.	.									.		T	T	T					.	.	.	.	.	.			T	T	T								T	T	T
Template Predicted Secondary structure																													.	.	.	.	.	.									.									.	.	.	.	.	.
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.							.	.	.	.	.	.	.	.		360	.	.	.	.	.	.	.							.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
		387	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	G	I	K	A	M	F	R	A	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	Q	I	L	G	E	I	L	D	R	K
Template Known Secondary structure												T
Template Predicted Secondary structure
Template SS confidence
		392	.	.	.	.	.	.	.	400	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions