Job Description P77434 Confidence 99.96% Date Thu Jan 5 12:29:17 GMT 2012 Rank 135 Aligned Residues 327 % Identity 17% Template d1mdoa_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 1.70

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		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	I	D	F	S	M	G	N	P	D	G	A	T	P	P	H	I	V	E	K	L	C	T	V	A	Q	R	P	D	T	H	G	Y	S	T	S	R	G	I	P	R	L	R	R	A	I	S	R	W	Y	Q	D	R	Y	D	V	E	I	D	P	E	S	E	A	I	V	T	I	G	S	K	E	G	L	A	H	L	M	L
Query Conservation
Alig confidence							.	.							.	.															.	.	.																					.	.	.	.	.	.	.	.	.
Template Conservation							.	.							.	.															.	.	.																					.	.	.	.	.	.	.	.	.
Template Sequence		D	F	L	P	F	.	.	S	R	P	A	X	G	.	.	A	E	E	L	A	A	V	K	T	V	L	D	S	G	.	.	.	W	I	T	T	G	P	K	N	Q	E	L	E	A	A	F	C	R	L	T	G	.	.	.	.	.	.	.	.	.	N	Q	Y	A	V	A	V	S	S	A	T	A	G	X	H	I	A	L	X
Template Known Secondary structure				B		S	.	.							.	.														T	.	.	.			S	S	S																.	.	.	.	.	.	.	.	.		S						S
Template Predicted Secondary structure							.	.							.	.															.	.	.																					.	.	.	.	.	.	.	.	.
Template SS confidence
		9	10	.	.	.			.	.	.	.	.	.			20	.	.	.	.	.	.	.	.	.	30	.	.	.				.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.										.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		117	.		.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		A	T	.	L	D	H	G	D	T	V	L	V	P	N	P	S	Y	P	I	H	I	Y	G	A	V	I	A	G	A	Q	V	R	S	V	P	L	V	E	G	V	D	F	F	N	E	L	E	R	A	I	R	E	S	Y	P	K	P	K	M	M	I	L	G	F	P	S	N	P	T	A	Q	C	V	E	L	E	F	F	E	K
Query Conservation				.
Alig confidence				.																																						.																					.	.	.											.	.	.
Template Conservation																																										.																					.	.	.											.	.	.
Template Sequence		A	L	G	I	G	E	G	D	E	V	I	T	P	S	X	T	W	V	S	T	L	N	X	I	V	L	L	G	A	N	P	V	X	V	D	V	D	R	D	T	.	L	X	V	T	P	E	H	I	E	A	A	I	T	P	Q	T	K	A	I	I	.	.	.	P	V	H	Y	A	G	A	P	A	D	.	.	.	L	D	A
Template Known Secondary structure			T	T			T	T							S	S	S											T	T								B		T	T	T	.			B											T	T						.	.	.		B		G	G	G					.	.	.
Template Predicted Secondary structure																																										.																					.	.	.											.	.	.
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.				.	.	.	.	.	.	.	140	.	.				.	.	.
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		V	V	A	L	A	K	R	Y	D	V	L	V	V	H	D	L	A	Y	A	D	I	V	Y	D	G	W	K	A	P	S	I	M	Q	V	P	G	A	R	D	V	A	V	E	F	F	T	L	S	K	S	Y	N	M	A	G	W	R	I	G	F	M	V	G	N	K	T	L	V	S	A	L	A	R	I	K	S	Y	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence																													.	.	.	.	.	.																				.																									.	.	.
Template Conservation																													.	.	.	.	.	.																				.
Template Sequence		I	Y	A	L	G	E	R	Y	G	I	P	V	I	E	D	A	A	H	A	T	G	T	S	Y	K	G	R	.	.	.	.	.	.	H	I	G	A	R	G	T	A	I	F	S	F	H	A	I	K	N	I	T	.	C	A	E	G	G	I	V	V	T	D	N	P	Q	F	A	D	K	L	R	S	L	K	F	H	G	L	G
Template Known Secondary structure										T			B					T	T		T	T				T	T		.	.	.	.	.	.		T	T	S	S	S								T	T	S	S	S		.	S	S	S							S												T	B	T	T
Template Predicted Secondary structure																													.	.	.	.	.	.																				.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.							.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.		.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
								273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.		.	.	.	320	.	.	.	.	.	.	.	.	.						330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure		.	.	.	.	.	.																																													.														.	.	.	.	.
Query SS confidence		.	.	.	.	.	.																																													.														.	.	.	.	.
Query Sequence		.	.	.	.	.	.	H	D	Y	G	T	F	T	P	L	Q	V	A	A	I	A	A	L	E	G	D	Q	Q	C	V	R	D	I	A	E	Q	Y	K	R	R	R	D	V	L	V	K	G	L	H	E	.	A	G	W	M	V	E	M	P	K	A	S	M	Y	.	.	.	.	.	V	W	A	K	I	P	E	P	Y	A	A
Query Conservation		.	.	.	.	.	.																																													.														.	.	.	.	.
Alig confidence		.	.	.	.	.	.																																													.														.	.	.	.	.
Template Conservation
Template Sequence		V	D	Q	A	E	V	L	A	P	G	Y	K	Y	N	L	P	D	L	N	A	A	I	A	L	A	Q	L	Q	K	L	D	A	L	N	A	R	R	A	A	I	A	A	Q	Y	H	Q	A	X	A	D	L	P	F	Q	P	L	S	L	P	S	W	E	H	I	H	A	W	H	L	F	I	I	R	V	D	E	A	R	C	G
Template Known Secondary structure								S	S				B																	T																					T	S	S								S	S							S												S
Template Predicted Secondary structure
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.																				.	.	370	.	.	.	.	.	.	.			.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Query Sequence		M	G	S	L	E	F	A	K	K	L	L	N	E	A	K	V	C	V	S	P	G	I	G	F	G	D	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	D	T	H	V	R	F	A	L	I	.	.	E	N	R	D	R	I	R	Q	A	I	R	G	I	K	A	M	F
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Alig confidence												.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Template Conservation												.
Template Sequence		I	T	R	D	A	L	X	A	S	L	.	K	T	K	G	I	G	T	G	L	H	F	R	A	A	H	T	Q	K	Y	Y	R	E	R	F	P	T	L	T	L	P	D	T	E	W	N	S	E	R	I	C	S	L	P	L	F	P	D	X	T	E	S	D	F	D	R	V	I	T	A	L	H	Q	I	A
Template Known Secondary structure		S										.			T	T	B			B						G	G	G	S							S	T	T											T	T								T	T
Template Predicted Secondary structure												.
Template SS confidence
		310	.	.	.	.	.	.	.	.	.		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions