Job Description P77434 Confidence 100.00% Date Thu Jan 5 12:29:17 GMT 2012 Rank 29 Aligned Residues 362 % Identity 19% Template d1iaya_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.70

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.							.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.			.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.																													.	.
Query SS confidence																																		.	.	.	.	.	.																													.	.
Query Sequence		R	R	G	E	D	I	I	D	F	S	M	G	N	P	D	G	A	T	P	P	H	I	V	E	K	L	C	T	V	A	Q	R	.	.	.	.	.	.	P	D	T	H	G	Y	S	T	S	R	G	I	P	R	L	R	R	A	I	S	R	W	Y	Q	D	R	Y	D	.	.	V	E	I	D	P	E	S	E	A	I	V	T
Query Conservation																																		.	.	.	.	.	.																													.	.
Alig confidence																			.															.	.	.	.	.	.																													.	.						.
Template Conservation																			.																																																								.
Template Sequence		K	N	P	N	G	V	I	Q	M	G	L	A	E	N	Q	L	C	.	L	D	L	I	E	D	W	I	K	R	N	P	K	G	S	I	C	S	S	F	K	A	I	A	N	F	Q	D	Y	H	G	L	P	E	F	R	K	A	I	A	K	F	M	E	K	T	R	G	G	R	V	R	F	D	P	.	E	R	V	V	M	A
Template Known Secondary structure		S	S	T	T	S	B				S	S					S	S	.												T	T	S	S	T	T												T	T																	T	T	T		S				T	.	T	S
Template Predicted Secondary structure																			.																																																								.
Template SS confidence
		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.		.	.	.	.	.	120
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.		.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170							.	.	.	.	.	.	.
Predicted Secondary structure																																									.																												.	.	.	.	.	.
Query SS confidence																																									.																												.	.	.	.	.	.
Query Sequence		I	G	S	K	E	G	L	A	H	L	M	L	A	T	L	D	H	G	D	T	V	L	V	P	N	P	S	Y	P	I	H	I	Y	G	A	V	I	A	G	.	A	Q	V	R	S	V	P	L	V	E	G	V	D	F	F	N	E	L	E	R	A	I	R	E	S	Y	P	.	.	.	.	.	.	K	P	K	M	M	I	L
Query Conservation																																									.																												.	.	.	.	.	.
Alig confidence																																									.																												.	.	.	.	.	.
Template Conservation
Template Sequence		G	G	A	T	G	A	N	E	T	I	I	F	C	L	A	D	P	G	D	A	F	L	V	P	S	P	Y	Y	P	A	F	N	R	D	L	R	W	R	T	G	V	Q	L	I	P	I	H	C	E	S	S	N	N	F	K	I	T	S	K	A	V	K	E	A	Y	E	N	A	Q	K	S	N	I	K	V	K	G	L	I	L
Template Known Secondary structure																		T	T							S	S			T	T					T	T	T	T	T											T	T	T	T	T																	T	T
Template Predicted Secondary structure
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.								.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure																																																										.	.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.	.
Query Sequence		G	F	P	S	N	P	T	A	Q	C	V	E	L	E	F	F	E	K	V	V	A	L	A	K	R	Y	D	V	L	V	V	H	D	L	A	Y	A	D	I	V	Y	D	G	W	K	A	P	S	I	M	Q	V	P	G	A	R	.	.	.	.	.	.	.	D	V	A	V	E	F	F	T	L	S	K	S	Y	N	M	A	G
Query Conservation																																																										.	.	.	.	.	.	.
Alig confidence																																																										.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	N	P	S	N	P	L	G	T	T	L	D	K	D	T	L	K	S	V	L	S	F	T	N	Q	H	N	I	H	L	V	C	D	E	I	Y	A	A	T	V	F	D	T	P	Q	F	V	S	I	A	E	I	L	D	E	Q	E	M	T	Y	C	N	K	D	L	V	H	I	V	Y	S	L	S	K	D	M	G	L	P	G
Template Known Secondary structure			S	S		T	T	T																		T	T	T								T	T	G	G	G			S	S	S										T	S	G	G	G	T	T	S		T	T	S							S	T	T	T	S	S		G	G
Template Predicted Secondary structure
Template SS confidence
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.			.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.
Query SS confidence																																												.	.
Query Sequence		W	R	I	G	F	M	V	G	N	K	T	L	V	S	A	L	A	R	I	K	S	Y	H	D	Y	G	T	F	T	P	L	Q	V	A	A	I	A	A	L	E	G	D	.	.	Q	Q	C	V	R	D	I	A	E	Q	Y	K	R	R	R	D	V	L	V	K	G	L	H	E	A	G	W	M	V	E	M	P	K	A	S	M
Query Conservation																																												.	.
Alig confidence																																												.	.
Template Conservation
Template Sequence		F	R	V	G	I	I	Y	S	F	N	D	D	V	V	N	C	A	R	K	M	S	S	F	G	L	V	S	T	Q	T	Q	Y	F	L	A	A	M	L	S	D	E	K	F	V	D	N	F	L	R	E	S	A	M	R	L	G	K	R	H	K	H	F	T	N	G	L	E	V	V	G	I	K	C	L	K	N	N	A	G	L
Template Known Secondary structure		G								S													T	T	S														T	T																														T	T			B				S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
		329	330	.	.	.	.	.	.	.	.	.	340				.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.		.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure														.	.	.																																							.
Query SS confidence														.	.	.																																							.
Query Sequence		Y	V	W	A	K	I	P	E	P	Y	A	A	.	.	.	M	G	S	L	E	F	A	K	K	L	L	N	E	A	K	V	C	V	S	P	G	I	G	F	G	D	Y	G	D	T	H	V	R	F	A	L	I	E	.	N	R	D	R	I	R	Q	A	I	R	G	I	K	A	M	F	R	A
Query Conservation														.	.	.																																							.
Alig confidence														.	.	.																																							.
Template Conservation
Template Sequence		F	C	W	M	D	L	R	P	L	L	R	E	S	T	F	D	S	E	M	S	L	W	R	V	I	I	N	D	V	K	L	N	V	S	P	G	S	S	F	E	C	Q	E	P	G	W	F	R	V	C	F	A	N	M	D	D	G	T	V	D	I	A	L	A	R	I	R	R	F	V	G	V
Template Known Secondary structure								G	G	G		S	S	S	S														T	S							G	G	G	G	T		S	S	S	S							S	S	S																		T
Template Predicted Secondary structure
Template SS confidence
		365	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions