Job Description P77434 Confidence 99.82% Date Thu Jan 5 12:29:17 GMT 2012 Rank 222 Aligned Residues 357 % Identity 14% Template d1ejia_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.90

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.							.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.
Query Sequence		N	I	T	A	E	L	K	M	A	A	R	R	R	G	E	D	I	I	D	F	S	M	G	N	P	D	G	A	T	P	P	H	I	V	E	K	L	C	T	V	A	Q	R	.	.	.	.	.	.	P	D	T	H	G	Y	S	T	S	R	G	I	P	R	L	R	R	A	I	S	R	W	Y	Q	D	R	Y	D	V	E	I
Query Conservation																																													.	.	.	.	.	.
Alig confidence																											.	.																	.	.	.	.	.	.
Template Conservation																											.	.
Template Sequence		A	E	V	Y	S	I	I	K	K	E	S	N	R	Q	R	V	G	L	E	L	I	A	S	E	N	.	.	F	A	S	R	A	V	L	E	A	L	G	S	S	L	N	N	K	Y	S	E	G	Y	P	G	Q	R	Y	Y	G	G	T	E	F	I	D	E	L	E	X	L	C	Q	K	R	A	L	Q	A	Y	H	L	D	P
Template Known Secondary structure																	S	S					T	T			.	.											T	S	G	G	G	G					S		S	S	S		S	S	S																				T	T			T
Template Predicted Secondary structure																											.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.			.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.											.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.	.
Query Sequence		D	P	E	S	E	A	I	V	T	I	G	S	K	E	G	L	A	H	L	M	L	A	T	L	D	H	G	D	T	V	L	V	P	N	P	S	Y	P	I	H	I	Y	G	.	.	.	.	.	.	.	.	.	.	A	V	I	A	G	A	Q	V	R	S	V	P	L	V	E	G	V	D	F	F	N	E	L	E	R	A	I
Query Conservation																																													.	.	.	.	.	.	.	.	.	.
Alig confidence																																													.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	C	W	G	V	N	V	Q	P	Y	S	G	S	P	A	N	F	A	V	Y	T	A	L	V	E	P	H	G	R	I	X	G	L	D	L	P	D	G	G	H	L	T	H	G	F	X	T	D	K	K	K	I	S	A	T	S	I	F	F	E	S	X	P	Y	K	V	Y	P	E	T	G	Y	I	N	Y	D	Q	L	E	E
Template Known Secondary structure		T	T								S	S													T		T	T								G	G	G	T			G	G	G			B		S	S		B		S						S							B		T	T	T		S	B
Template Predicted Secondary structure
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	S	Y	P	K	P	K	M	M	I	L	G	F	P	S	N	P	T	A	Q	C	V	E	L	E	F	F	E	K	V	V	A	L	A	K	R	Y	D	V	L	V	V	H	D	L	A	Y	A	D	I	V	Y	D	G	W	K	A	P	S	I	M	Q	V	P	G	A	R	D	V	A	V	E	F	F	T	L	S	K	S
Query Conservation
Alig confidence																							.	.	.	.	.																																									.	.	.	.	.
Template Conservation																							.	.	.	.	.																																									.	.	.	.	.
Template Sequence		N	A	S	L	F	H	P	K	L	I	I	A	G	T	S	C	Y	S	R	N	L	.	.	.	.	.	D	Y	A	R	L	R	K	I	A	D	D	N	G	A	Y	L	X	A	D	X	A	H	I	S	G	L	V	A	A	G	V	V	P	S	P	F	E	H	C	H	.	.	.	.	.	V	V	T	T	T	T	H	K	T
Template Known Secondary structure									S							S	S			S			.	.	.	.	.												T	T								G	G	G						T	T	S	S			G	G	G	T		S	.	.	.	.	.						S	S	G	G
Template Predicted Secondary structure																							.	.	.	.	.																																									.	.	.	.	.
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.						210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.						250	.	.	.	.	.	.	.	.
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260																.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.			.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.
Query Sequence		Y	N	M	A	G	W	R	I	G	F	M	V	G	N	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	L	V	S	A	L	A	R	I	K	S	Y	H	D	Y	G	T	F	T	P	L	Q	V	A	A	I	A	A	L	E	G	D	Q	.	.	Q	C	V	R	D	I	A	E	Q	Y	K	R	R	R	D
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.
Alig confidence			.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.
Template Conservation			.	.
Template Sequence		L	.	.	R	G	C	R	A	G	X	I	F	Y	R	K	G	V	R	S	V	D	P	K	T	G	K	E	T	Y	Y	E	L	E	S	L	I	N	S	A	V	F	P	G	L	Q	G	G	P	H	N	H	A	I	A	G	V	A	V	A	L	K	Q	A	X	T	T	E	F	K	I	Y	Q	L	Q	V	L	A	N	C	R
Template Known Secondary structure		G	.	.				S															S	T	T																	T	T	T	T			S																	T	S
Template Predicted Secondary structure			.	.
Template SS confidence
		259			260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.		.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.				.	370	.	.	.	.	.	.							.	.
Predicted Secondary structure																			.																																												.	.	.									.	.	.	.	.	.
Query SS confidence																			.																																												.	.	.									.	.	.	.	.	.
Query Sequence		V	L	V	K	G	L	H	E	A	G	W	M	V	E	M	P	K	.	A	S	M	Y	V	W	A	K	I	P	E	P	Y	A	A	M	G	S	L	E	F	A	K	K	L	L	N	E	A	K	V	C	V	S	P	G	I	G	F	G	D	Y	G	.	.	.	D	T	H	V	R	F	A	L	.	.	.	.	.	.	I	E
Query Conservation																			.																																												.	.	.									.	.	.	.	.	.
Alig confidence																			.												.	.													.																		.	.	.									.	.	.	.	.	.
Template Conservation																															.	.													.
Template Sequence		A	L	S	D	A	L	T	E	L	G	Y	K	I	V	T	G	G	S	D	N	H	L	I	L	X	D	L	R	S	.	.	K	G	T	D	G	G	R	A	E	K	V	L	.	E	A	C	S	I	A	C	N	K	N	T	C	P	G	D	K	S	A	L	R	P	S	G	L	R	L	G	T	P	A	L	T	S	R	G	L
Template Known Secondary structure										T	T			B	T	T	S	S		S	S	S						G	G	G	.	.	G	T											.			T	T				B					S	S	S	S		T	T	S		S											T	T	T
Template Predicted Secondary structure																															.	.													.
Template SS confidence
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.			.	.	.	.	370	.	.	.	.	.	.	.		.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.
		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	R	D	R	I	R	Q	A	I	R	G	I	K	A	M	F	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	E	E	D	F	Q	K	V	A	H	F	I	H	R	G	I	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		414	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions